RNA id: TU76607


Basic Information

Item Value
RNA id TU76607
length 580
RNA type TUCP
GC content 0.50
exon number 3
gene id G57036
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40877882 ~ 40884606 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtatgtgtatgcgtgcatgtgtgtgtgtgtgtctgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtccctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtccctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtccctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctctgtgtctctgtgtgtgtgtctctctgtgtctgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76718 lncRNA downstream 26603 40841045 ~ 40851279 (-) False G57125
TU76719 lncRNA downstream 26603 40841045 ~ 40851279 (-) True G57125
TU76714 lncRNA downstream 74136 40803469 ~ 40803746 (-) True G57121
TU76699 lncRNA downstream 83020 40764589 ~ 40794862 (-) True G57110
TU76690 lncRNA downstream 103220 40751144 ~ 40774662 (-) False G57104
TU76721 lncRNA upstream 3811 40888417 ~ 40889903 (-) True G57127
TU76722 lncRNA upstream 26682 40911288 ~ 40919326 (-) True G57128
TU76609 lncRNA upstream 42699 40927305 ~ 40939493 (-) True G57038
TU76588 lncRNA upstream 85382 40969988 ~ 40978899 (-) True G57029
TU76733 lncRNA upstream 127467 41012073 ~ 41110667 (-) False G57134
XM_039801396.1 mRNA downstream 41673 40777034 ~ 40836209 (-) True LOC120559573
XM_039801035.1 mRNA downstream 208539 40660809 ~ 40669343 (-) True LOC120559369
XM_039801033.1 mRNA downstream 230110 40637691 ~ 40647772 (-) True LOC120559368
XM_039801034.1 mRNA downstream 230125 40637691 ~ 40647757 (-) False LOC120559368
XM_039801036.1 mRNA downstream 275792 40598805 ~ 40602090 (-) True LOC120559370
XM_039800728.1 mRNA upstream 243695 41128301 ~ 41137726 (-) False LOC120559188
XM_039800495.1 mRNA upstream 281249 41165855 ~ 41199134 (-) True LOC120559074
XM_039799676.1 mRNA upstream 411474 41296080 ~ 41707346 (-) False LOC120558615
XM_039799675.1 mRNA upstream 411474 41296080 ~ 41707346 (-) True LOC120558615
XM_039799674.1 mRNA upstream 411474 41296080 ~ 41313319 (-) False LOC120558615
TU76679 other downstream 215996 40661025 ~ 40661886 (-) False LOC120559369
TU76071 other downstream 1263645 39550498 ~ 39614237 (-) True G56721
TU76067 other downstream 1343242 39509552 ~ 39534640 (-) False plxna3
TU76064 other downstream 1418008 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 1635144 39237644 ~ 39242738 (-) False G56599
unassigned_transcript_237 other upstream 56248 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 60849 40945455 ~ 40945527 (-) True trnak-uuu_9
unassigned_transcript_239 other upstream 63923 40948529 ~ 40948601 (-) True trnak-uuu_10
unassigned_transcript_240 other upstream 66917 40951523 ~ 40951595 (-) True trnak-uuu_11
TU76730 other upstream 135874 41020480 ~ 41078750 (-) False G57134

Expression Profile