RNA id: TU76657


Basic Information

Item Value
RNA id TU76657
length 375
lncRNA type read_through
GC content 0.49
exon number 4
gene id G57078
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40546801 ~ 40612347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAGAATAATATATCAGCTGTTACACCTGAACACcagcaagacacacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaggcacacacacacacacacagacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacatagacacacacagagacacacacacacacacagacacagaggcacacagacacacacacacacacagacacacacagacacacacacaaacagacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76601 lncRNA downstream 87408 40386363 ~ 40459393 (-) False G57032
TU76698 lncRNA upstream 105836 40718183 ~ 40794862 (-) False G57110
TU76691 lncRNA upstream 131617 40743964 ~ 40774662 (-) False G57104
TU76690 lncRNA upstream 138797 40751144 ~ 40774662 (-) False G57104
TU76703 lncRNA upstream 140890 40753237 ~ 40771432 (-) True G57114
TU76699 lncRNA upstream 152242 40764589 ~ 40794862 (-) True G57110
XM_039799943.1 mRNA downstream 292536 40251556 ~ 40254265 (-) True LOC120558739
XM_039799936.1 mRNA downstream 413948 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA downstream 413949 40039985 ~ 40132852 (-) False gripap1
XM_039799446.1 mRNA downstream 918324 39466226 ~ 39628477 (-) True plxna3
XM_039800156.1 mRNA downstream 1198614 39333262 ~ 39348187 (-) True LOC120558856
XM_039801033.1 mRNA upstream 25344 40637691 ~ 40647772 (-) True LOC120559368
XM_039801034.1 mRNA upstream 25344 40637691 ~ 40647757 (-) False LOC120559368
XM_039801035.1 mRNA upstream 48462 40660809 ~ 40669343 (-) True LOC120559369
XM_039801396.1 mRNA upstream 164687 40777034 ~ 40836209 (-) True LOC120559573
XM_039800493.1 mRNA upstream 232861 40845208 ~ 41025474 (-) True itpr3
TU76071 other downstream 932564 39550498 ~ 39614237 (-) True G56721
TU76067 other downstream 1012161 39509552 ~ 39534640 (-) False plxna3
TU76064 other downstream 1086927 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 1304063 39237644 ~ 39242738 (-) False G56599
TU75880 other downstream 1344375 39198738 ~ 39202426 (-) False G56598
TU76679 other upstream 48678 40661025 ~ 40661886 (-) False LOC120559369
TU76612 other upstream 221751 40834098 ~ 40903924 (-) True G57041
TU76607 other upstream 265535 40877882 ~ 40884606 (-) True G57036
unassigned_transcript_237 other upstream 328507 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 333108 40945455 ~ 40945527 (-) True trnak-uuu_9

Expression Profile