RNA id: TU76757



Basic Information


Item Value
RNA id TU76757
length 422
lncRNA type inter_gene
GC content 0.57
exon number 4
gene id G57142
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 41063011 ~ 41063672 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acaggtctggttacaccgccacctacaggtctcgttacacctccacctacaggtctcgttacaccgccacctacaggtctcgttacaccgccacctacaggtctggttacaccgccacctacaggtctcgttacaccgccacctacaggtctcgttacagcgccacctacaggtctcgttacaccgccacctacaggtctcgttacagcgccacctacaggtctcgttacacctccacctacaggtctcgttacacctccacctacaggtctcgttacacctccacctacaggtctcgttacaccgccacctacaggtctggttacacctccacctacaggtctcgttacaccgccacctacaggtctcgttacaccgccacctacaggtctggttacaccgccacctacaggtctggttac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639363.1 lncRNA downstream 8126 41054105 ~ 41054885 (-) True LOC120559792
TU76588 lncRNA downstream 84112 40969988 ~ 40978899 (-) True G57029
TU76609 lncRNA downstream 123518 40927305 ~ 40939493 (-) True G57038
TU76722 lncRNA downstream 143685 40911288 ~ 40919326 (-) True G57128
TU76721 lncRNA downstream 173108 40888417 ~ 40889903 (-) True G57127
TU76759 lncRNA upstream 7704 41071376 ~ 41072514 (-) True G57144
TU76605 lncRNA upstream 46038 41109710 ~ 41112961 (-) True G57034
TU76599 lncRNA upstream 57599 41121271 ~ 41126279 (-) True G57031
TU76600 lncRNA upstream 57725 41121397 ~ 41126279 (-) False G57031
TU76581 lncRNA upstream 62663 41126335 ~ 41136618 (-) True LOC120559188
XM_039800493.1 mRNA downstream 37537 40845208 ~ 41025474 (-) True itpr3
XM_039801396.1 mRNA downstream 226802 40777034 ~ 40836209 (-) True LOC120559573
XM_039801035.1 mRNA downstream 393668 40660809 ~ 40669343 (-) True LOC120559369
XM_039801033.1 mRNA downstream 415239 40637691 ~ 40647772 (-) True LOC120559368
XM_039800728.1 mRNA upstream 64629 41128301 ~ 41137726 (-) False LOC120559188
XM_039800495.1 mRNA upstream 102183 41165855 ~ 41199134 (-) True LOC120559074
XM_039799676.1 mRNA upstream 232408 41296080 ~ 41707346 (-) False LOC120558615
XM_039799675.1 mRNA upstream 232408 41296080 ~ 41707346 (-) True LOC120558615
XM_039799674.1 mRNA upstream 232408 41296080 ~ 41313319 (-) False LOC120558615
unassigned_transcript_240 other downstream 111416 40951523 ~ 40951595 (-) True trnak-uuu_11
unassigned_transcript_239 other downstream 114410 40948529 ~ 40948601 (-) True trnak-uuu_10
unassigned_transcript_238 other downstream 117484 40945455 ~ 40945527 (-) True trnak-uuu_9
unassigned_transcript_237 other downstream 122085 40940854 ~ 40940926 (-) True trnak-uuu_8
TU76607 other downstream 178405 40877882 ~ 40884606 (-) True G57036
TU76729 other upstream 6691 41070363 ~ 41078750 (-) True G57134
TU76761 other upstream 67210 41130882 ~ 41131470 (-) True G57146
TU76906 other upstream 664371 41728043 ~ 41731776 (-) False LOC120559079
XR_005639137.1 other upstream 840468 41904140 ~ 41918741 (-) True LOC120558546
XR_005639139.1 other upstream 840468 41904140 ~ 41918739 (-) False LOC120558546

Expression Profile