RNA id: XM_039799733.1


Basic Information

Item Value
RNA id XM_039799733.1
length 2264
RNA type mRNA
GC content 0.45
exon number 9
gene id gnai3
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23109930 ~ 23126912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGCGCGACTGCGCAGCAGCAATAGTCTTGAGGGAAAATCTGCTGATTTTTATTGagaatttttctttaaaaagacaacatcatacataaaaatacaaatatctaCTTAAAGTAATTAGATTTCTggttttctatattttttttttgtatgttctTCTGTGAGTCTAAACTTCGGACGATTTggataaaaatattttaaagcatctgTTCGGGGAGTATTTTCGCTTAACACCCCGTATTTGATCACCTGTAGCCTACAGGCAGCAGTGTGTGGACTGAATCAGTGTCAGCATCAGACTTCAGTTGGACAGACGAGACTCCGGTGCCAACGCcttttctgcctctctctcgGCTGGGAAACTTTACACCGACCCAAGGGCTCGTTTTGACGGCGTTTCCCTTCGACTCATGAGCTGCTGAAACTATAATCCGACACTAAAGAAGTAGTTTGAGAGTGAAAATGGGCTGCACGATCAGCGCCGAGGACAAAGCTGCGGTGGAGAGGAGTAAAATGATTGATAAAAACCTGCgggaagacagagagaaatccTCCAGAGAAGTGAAACTGCTTCTGCTCGGTGCTGGGGAATCTGGGAAAAGCACAATAGTAAAGCAGATGAAAATTATTCATGAAGATGGCTACTCAGAAGAGGAGTGCAAGCAGTACAAAGTGGTGGTGTACAGCAACACCATCCAGTCCATCATGGCCATCATCAGGGCGATGGGCCGGTTAAAGATAGATTTTGGGGAACCTGCACGGGCAGACGACGCCCGCCAGCTGTTTGTCCTGGCGAGCTCGGCGGAGGAAGGGGTAATGTCGGCAGAGCTGACCGGCGTGATTCAGAGACTGTGGAGGGATGGCGGAGTTCAGACCTGCTTTGATCGATCACGAGAGTATCAGCTCAACGACTCTGCTGCATACTACCTGAATGACCTGGACAGGATCTGTCAGCCAGACTACATCCCGTCTCAGCAGGATGTGCTACGCACTCGTGTAAAGACCACTGGCATCGTGGAAACTCACTTCACCTTCAAAGATCTCTACTTCAAGATGTTTGATGTTGGGGGTCAGCGCTCGGAGAGGAAGAAGTGGATCCATTGTTTTGAGGGAGTCACATCTATCATTTTCTGCGTAGCGCTCAGTGACTACGACCTCGTCTTGGCTGAGGATGAGGAGATGAACCGGATGCATGAGAGCATGAAGCTTTTCGACTCCATCTGCAACAACAAGTGGTTCACGCTCACCTCCATCATCCTCTTCCTCAACAAGAAGGACTTGTTTGAAGAGAAGATCAATAGGAGTCCACTCACTATCTGCTACCCCGATTACCCTGGTGGGCACTCATACGACGAGACTGCAGCCTATATCCAGTGCCAGTTTGAAGACTTAAACAAACGAAAGGACACCAAGGAGATCTACACCCACTTCACCTGTGCCACAGACACCAAGAATGTGCAGTTTGTGTTTGACGCTGTCACCGACATCATCATCAAGATCAACCTGACGGAGATCGGGCTCTACTAAAGCTTCAGGCCCTGTTGGTGTCTGGAGCAGAATCAGGACTTCTGGGCAGGTATGTCTTGTCTGCAGAGGGTGAATTGGAACGTAGGTGTTACTAAGGACTGAGCTGGTGGCCACACAGCATGTCGGACCTAAATTCCACAATTTGGGAACTTGATACTACAATTGCTTTTGTCTTAATATATGTTATGATGCAGAGCATACTGGGAGGAAGTGATAAGTGTGGGAGGCTTGTGAAATGATCACTGTGAGATCTGTGGAGTCCTGTCATATTTAAGACCTTTGCATCATTCGTGGGCTGGCAAGAAAAGCCCCTCTGATGTCTCTGACACATTTATACTTTGTCTGTAATATGTACAAGGACCAAAACAAATCCATCACTGCATTTCACAGATTCACATCTGATATGTAAATTCTGTTCACTTTTTTCTGTTGCATCTTCTCTTAGCCTCTCTTAGTCTGTATCACATCATTTTTATTGGAataattgcattttattttaatttttcagTTGCAATGGTATAGTATTTCCACTTCTGGATGTGTGAATGCAATAACTTATGTATGGAGAGAAGGGTTTTTTGTGAGCAGTTTTGATGTATATAACGTAAACTTTTGGGTCGGGGATTAGTTAGCAAGAGTGTACTCAGTAGCAACACGGCTGTCTAcatagttaaagtgatggttcggagtaattcaccctagggtcctttgcaccatgacctcgagccaaacctGGTTC

Function

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69915 lncRNA upstream 41454 22991252 ~ 23068476 (+) False atxn7l2b
TU69903 lncRNA upstream 86602 23020806 ~ 23023328 (+) True G52364
TU69904 lncRNA upstream 86602 23020806 ~ 23023328 (+) False G52364
TU69923 lncRNA upstream 89922 23009177 ~ 23020008 (+) True G52379
TU69880 lncRNA upstream 221243 22884049 ~ 22888687 (+) True G52342
TU69951 lncRNA downstream 13998 23140910 ~ 23187708 (+) False G52403
TU69954 lncRNA downstream 60488 23187400 ~ 23192988 (+) True G52403
TU70027 lncRNA downstream 95014 23221926 ~ 23246504 (+) True G52461
TU70058 lncRNA downstream 138319 23265231 ~ 23275195 (+) True LOC120558323
TU70061 lncRNA downstream 138319 23265231 ~ 23275195 (+) False LOC120558323
XM_039799222.1 mRNA upstream 5835 23099553 ~ 23104095 (+) True gpr61
XM_039800302.1 mRNA upstream 41451 23062237 ~ 23068479 (+) True atxn7l2b
XM_039800303.1 mRNA upstream 41451 23062237 ~ 23068479 (+) False atxn7l2b
XM_039800300.1 mRNA upstream 48595 23057049 ~ 23061335 (+) True sypl2b
XM_039800301.1 mRNA upstream 48595 23057049 ~ 23061335 (+) False sypl2b
XM_039799735.1 mRNA downstream 18774 23145686 ~ 23167490 (+) True ampd2b
XM_039801813.1 mRNA downstream 43322 23170234 ~ 23176129 (+) True LOC120559793
XM_039800823.1 mRNA downstream 66474 23193386 ~ 23200479 (+) True LOC120559240
XM_039800822.1 mRNA downstream 66475 23193387 ~ 23198965 (+) False LOC120559240
XM_039800821.1 mRNA downstream 66476 23193388 ~ 23200479 (+) False LOC120559240
TU69870 other upstream 262992 22842066 ~ 22846938 (+) False lamtor5
XR_005639388.1 other upstream 547409 22562154 ~ 22562521 (+) True LOC120559933
TU69718 other upstream 549602 22556329 ~ 22560328 (+) True G52210
TU69473 other upstream 1015040 22093905 ~ 22094890 (+) False LOC120558641
TU69454 other upstream 1049285 22056721 ~ 22060645 (+) False avpr2aa
TU70197 other downstream 632322 23759234 ~ 23765153 (+) False tmem201
TU70648 other downstream 1826530 24953442 ~ 24957330 (+) True G52871
TU70864 other downstream 2616698 25743610 ~ 25748317 (+) True tprg1l
TU70970 other downstream 2944673 26071585 ~ 26076664 (+) False G53096
TU71155 other downstream 3225548 26352460 ~ 26353463 (+) True G53232

Expression Profile