RNA id: XM_039799787.1


Basic Information

Item Value
RNA id XM_039799787.1
length 8094
RNA type mRNA
GC content 0.53
exon number 59
gene id mtor
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 30103231 ~ 30199840 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACGCTTGTGAAGTTCGCTGTATGTAGCTAGCTGGAGCTGGTCCAACTCAACAGAGCGATACCATAGCCAGCTAGCATTTATCTGTGCTAGCCAGATAGTCGTACAATGAGAGATATTCTGCAAGAGCCGAATAGCAATTAAGTGGCCGACATATTAATAGAAACACATTAGGCCATCCAAATGGTAATCATGTCAGGCACAGCCACTGTGCTGCAACAGTTTATCAGTGGGCTGAAGAGTCGAAATGAAGACACCAGAGCAAAATCTGCCAAAGATCTGCAGCACTATGTGACTACAGAGCTCAGAGAGTTAAGCCAAGATGAAGCCACTACATTCTATGATGAGTTAAACCACCACATATTTGAGCTGGTATCCAGCTCTGATGTGAATGAGAAGAAAGGAGGGATTCTCGCCATTGTGAGTCTGATTGGAGTCGAGGGAGGCAATGCCACCAGGATCAGCCGCTTTGCCAATTACCTGCGCAACCTGCTCCCCTCCAGCGACCCCGTGGTGATGGAGATGGCCTCTAAAGCCATGGGCCACCTGTCTATGGCTGGGGACACCTTTACTGCTGAATATGTGGAGTTTGAGGTGAAGAGGGCCCTGGAGTGGCTGGGAGCAGACAGAAATGAAGGCAGACGCCATGCTGCAGTGTTGGTGTTGAGGGAGCTGGCTGTGAGCGCACCCACCTTTTTCTTTCAGCAAGTGCAGCCCTTCTTTGACAACATCTTTTACGCGGTATGGGACCCCAAGCAGGCCATCCGAGAAGGGGCAGTATCTGCACTGCGAGCCTCTCTCATCCTCACCACACAGAGGGAGACCAAGGAAATGCAGAAACCACAGTGGTACAAACAAACCTTTGAGGAAGCAGAGAAAGGCTTCGATGAGACTTTGGCCAAAGAGAAAGGGATGAATCGTGACGACAGGGTCCACGGTGCTCTTCTGATCCTAAATGAGCTGGTTCGCATCAGCAGCATGGAGGGAGAGCGCATGCgtgaggagatggaggagatcacgcagcagcagctggtccATGATAAGTACTGCAAGGAGATGATGGGATTTGGAGCCAAGCCACGACACATCACACCTTTTACTAGCTTCCAGTCGGTGCAGCCACAGCAGTCAAACGCCCTCCTGGGCCTGCTGGGCTACAGCACGCCTCAGGGCTACCTCAGCTTCGGAGCCACGCCGGCACCTACCAAGAGCTTGCTGGTGGAGAGTCGATACTGCCGTGAGCTGATGGAGGAACGATTCGACCAGGTGTGTCGGTGGGTGCTGAAATACAAGACCAGTAAAAACCCTCTGATCCAGATGACCATCCTCAACCTCCTTCCACGCCTTGCTGCCTTCCAGCCAAATAACTTTACAGACCAGTACCTCTCAGACACTATGGGCTACCTGCTGGCCAGtctgaagaaggagaaggagaggacgTCAGCTTTCCAGGCCCTGGGGCTGCTGGTAGTGGCCGTCAGGGCAGAAATCCAGCCTTACCTCACAAAGATCCTTGAAATCATCAAGGCTGCCCTGCCACCCAAGGACTTTGCACACAAGAGACAGAAGACCATGCAGGTGGATGCCACAGTGTTTACCTGTATCAGCATGCTCTCCAGAGCCATGGGTCCCAGCATCCAACCAGACATCAAGGAGCTGCTGGAGCCTATGCTGGCTGTGGGCCTCAGTCCTGCCCTGACAGCAGTGCTGTACGACCTGAGCCGTCAAATTCCCCAGTTGAAGAAGGACATCCAGGACGGCCTGCTGAAGATGCTTTCCCTGGTGTTGATGCACAAGCCGCTGCGTCACCCCGGCATGCCCAAAGGCTTGGCTCACCAGCTGTCCTCGCCAAGCCTCACAAACATCCCAGAGGCCAGTGACGTAGGCAGCATCACACTGGCCCTACGCACGCTGGGAAGCTTTGAGTTTGAAGGACACTCCCTCACCCAGTTTGTGCGCCACTGTGCTGATCACTTCCTGAACAGTGAACACAAGGAAATCCGGATGGAGGCAGCTCGGACCTGCTCACGCCTCCTTACCCCCTCCATCCACCTGATCAGCGGCCATGTTGTCAGCCAGACCGCTGTGCAGGTTGTTGCAGATGTGCTCAGCAAGCTGTTAGTTGTTGGCATCACTGACCCAGATCCAGACATTCGATATTGTGTGCTGGCATCTCTTGATGAGCGCTTTGACGCTCACCTTGCCCAGGCTGAGAACTTACAGGCGCTGTTTGTTGCACTAAATGATGAGGTGTTTGAGATCAGAGAGCTGGCCATCTGCACAATCGGACGCCTCAGCAGCATGAACCCTGCCTTTGTCATGCCCTTCCTACGCAAGATGCTCATTCAGATCTTAACCGAGTTGGAGCACAGTGGTGTCGGCAGGAACAAAGAGCAGAGTGCTCGTATGCTTGGCCATCTAGTCTCCAACGCCCCCCGCCTCATACGGCCATATATGGAGCCCATCCTCAAGGCTCTAATCCTCAAGCTGAAAGACCCAGACCCCAACCCTGGAGTGGTCATTAGTGTCCTGGCGACCATCGGCGAGTTGGCCCAGGTGAGTGGCTTGGAGATGAGGAAGTGGATGGACGAGCTTTTTCCAATCATCATGGACATGCTGCAGGACTCCTCCTCATTGGCCAAACGACAGGTGGCACTGTGGACACTGGGCCAGCAGGTGGCTAGTACAGGTTATGTGGTGGAGCCCTACCGCAAGTACCCCTCCCTTCTGGAGGTGCTGCTCAACTTCCTCAAGACGGAACAAAACCAGGGCATAAGGAGAGAGGCTATCCGTGTACTGGGTCTTCTCGGAGCTCTGGACCCCTACAAGCACAAGGTGAACATCGGGATGATTGACCAGTCACGAGATGCCTCTGCTGTCAGTCTCTCTGAGTCCAAGTCCAGTCAGGACTCTGCGGACTACAGCACTAGTGAGATGCTAGTGAACATGGGCAACCTGCCCTTGGATGAGTTTTACCCTGCCGTGGCGATCGTCACTTTGATGCGCATCCTGAGAGACCCTTCACTCTCCAACCACCATACCATGGTGGTCCAGGCCGTCACCTTCATCTTTAAGTCTCTGGGCCTCAAGTGTGTCCAGTTCCTGCCCCAGGTCATGCCCACTTTCCTCAATGTCATCCGGGTCTGTGATGCCAGTATCCGAGAGTTCCTCTTCCAGCAGATGGGAATGGTGGTGTGCTTTGTGAAGATCCACATCCGCCCTTACATGGACGACATCTTCACCCTCATCAGAGAGTACTGGACACCAAACAACCCCATGCAGAACACCATCATCCTTCTGATCGAGCAGATTGTGGTGGCGCTGGGTGGAGAGTTCAAGCTCTACCTGCCTCAGCTTATCCCACACATGTTGCGTGTCTTCATGCACGACAACAGCACCGGGCGCAGTGTTACCATCAAGATGCTCAACGCCATCCAGCTGTTTGGTGCCAACCTAGATGACTACCTGCACTTGCTGCTGCCGCCCATTGTCAAACTGTTTGATGCCTCTGATGTGCCCCTGCAGGCCCGCAAGGTTGCCTTGGAGACACTGGACCGGCTGACCGAGTCCCTGGACTTCACTGACTATGCTTCACGCATTATCCACCCGATTGTTCGGACACTTGACAGCACGCCTGAGCTTCGCTCCACCTCTATGGACACCCTGTCCTCGCTAGTCTTCCAGTTGGGAAAAAAGTACCAGATCTTCATCCCCATGGTGAACAAAGTGATGCTGAAGCATCGGATCAACCACCAGCGTTATGACATACTCATATGTCGCATTGTTAAGGGCTATACTCTggctgaggaggaagaggacccTCTAATCTTCCAACATCGCCATCTTCGTGGTAACCAAGGTGATGCTCTGGTCAGCGGGCCTGTAGAGGCGGGGCCTATGAAGAAGCTTCATGTCAGCACTACTGCACTTCAGAAGGCTTGGGGTGCTGCCAGAAAGGTGTCCAAAGATGATTGGCTGGAGTGGCTGAGGCGCTTGAGTGTCGTGCTACTCAAGGAGTCGTCCTCCCCAGCTCTGCGATCATGCTGGTCACTAGCACAAACCTACATCCCTCTCGCCAGGGACCTGTTCAACGCAGCCTTCCTGTCTTGTTGGTCTGAGCTGAGTGAGGACCAGCAGGATGAGCTCATCCGCAGCATTGAATTAGCTCTCACCTCCCAGGACATCGCTGAGGTCACACAGACTCTGCTCAACCTGGCAGAGTTCATGGAGCACAGTGACAAGGGCCCTCTGCCTCTCAGAGACGATAATGGCATCGTGCTGCTTGGCGAGAGAGCTGCCAAATGTCGCGCCTACGCCAAAGCTTTGCACTACAAAGAGCTGGAGTTTCAGAAAGGTCCTTCTCCTCTCATCCTGGAGGCTCTTATCAGCATCAACAATAAACTGCAGCAGCCAGAAGCGGCATCTGGGGTGCTTGAGTACGCCATGAAGCATTTTGGAGAACTGGAAATCCAAGCCACTTGGTATGAGAAGCTACATGAGTGGGAGGATGCCCTGGTAGCATACGACAAGAAGATTGACATGAACAAAGAAGATCCAGAGCTCATCCTGGGCAGAATGCGCTGCTTAGAGGCCCTGGGAGAATGGGGCCAGTTGCATCAGCAGTGCTGCGAGGAGTGGACGCTGGTCAGCGAGGAAACCCAGGCCAAGATGGCTCgtatggctgctgctgccgcctgggGTCTAGGGCACTGGGACAGCATGGAGGAGTACACGTGTATGATCCCAAGAGACACACATGATGGGGCTTTTTATAGAGCAGTACTAGCCCTGCATCAGGACCTCTTCTCATTGGCCCAGCAGTGTATTGACAAAGCAAGAGACCTCCTGGATGCTGAGCTGACGGCCATGGCTGGAGAGAGCTACAGTCGAGCCTATGGGGCTATGGTGTCTAGCCAGATGCTGTCAGAACTAGAGGAGGTGATCCAGTATAAGCTGGTGCCAGAGAGGAGAGACATCATTAGGGATACGTGGTGGGAGAGGCTTcagGGTTGTCAGCGTATCGTAGAGGACTGGCAAAGGATCCTGATGGTCAGATCACTTGTCATCAGCCCCCACGAGGACATGAGGACTTGGTTGAAGTATGCCAGCCTCTGTGGCAAGAGCGGCCGCCTGGCACTGGCCCATAAGACCCTGGTGCTCCTTCTGGGTGTCGACCCCTCCAAGCAACTTGATCACCCGCTGCCCACAGCCCACCCACATGTCACCTACGCTTATATGAAGTACATGTGGAAGAGTAACCGCAAGATTGATGCCTTCCAGCACATGCAGCACTTTGTGCAAGGGATGCAGCAGCAAGCCCAACACGCCATCGCAGCCGAGGACCAACAGCATAAGCTGGAGCTCCACAAACTGATGGCTAGATGTTTCTTGAAGCTGGGAGAGTGGCAGCTCAGTCTGCAGGGCATCAACGAGAGCACCATCCCCAAGGTTCTGCAGTATTACAACCACTCCACTGAGCATGACCGCAACTGGTACAAGGCCTGGCATGCCTGGGCGGTAATGAACTTTGAGGCAGTGCTGCACTACAAACACCAGAACCAAGGACGTGacgagaagaagaagctgcGACACGCTAGTGGTGCCAGTGCTAATAGCGAAGCCAGCAACAGCGACAGCGAGGTCGACAGCACTGACCACAGTCCTGTGCCCTCACCCGGCCAGAAAAAGGTCAATGAGGACCTCTCAAAGACATTGCTCCTCTACACAGTTCCTGCTGTTCAAGGTTTCTTCCGCTCCATTTCCCTGTCCAGAGGCAATAACCTGCAGGACACACTAAGGGTTCTGACTCTGTGGTTTGACTATGGTCATTGGCCTGAGGTGAACGAAGCCCTGGTGGAGGGTATCAAGACCATTCAAATAGACACCTGGCTCcagGTGATCCCTCAGCTCATAGCTCGAATTGACACTCCTCGAGCCCTGGTGGGTCGCCTCATCCACCAGCTGCTAACAGACATCGGACGGTATCATCCCCAAGCTTTGATCTACCCGCTGACTGTGGCCTCCAAGTCCACCACAACAGCCCGCCACAATGCTGCTAACAAGATCCTGAAGAACATGTGTGAACACTGCAACACTCTGGTTCAGCAGGCCATCATGGTGAGTGAAGAGCTTATCCGAGTGGCCATCTTGTGGCACGAGATGTGGCACGAGGGCCTTGAAGAGGCGTCACGTCTTTACTTTGGCGAGCGCAACGTCAAGGGCATGTTTGCTGTGCTGGAGCCTCTACATGCCATGATGGAGAGGGGACCACAGACCCTCAAAGAGACCTCTTTTAACCAGGCTTACGGCAGGGACTTGATGGAGGCTCAGGACTGGTGCAGGAAATACATGCGCTGAAACGTGAAAGACCTGACGCAGGCCTGGGACCTCTATTATCATGTATTTAGACGTATCTCCAAACAGCTGCCACAGCTGACCTCCCTGGAGCTACAATATGTGTCTCCAAAGCTGCTGATGTGCCGGGACCTGGAGCTGGCAGTACCAGGAACTTATGACCCCAACCAGCCTATCATCCGCATCCAGTCCATCGCCGCCTCCCTGCAGGTCATCACCTCCAAGCAGCGCCCACGCAAACTCACCATTATGGGCAGCAATGGCCATGAGTTCATGTTCCTGTTGAAGGGCCATGAAGACCTGAGGCAGGATGAGAGAGTCATGCAGCTGTTTGGTCTGGTCAACACACTTCTGGCCAACGACCCTGCGTCCTTACGCAAGAACCTCAGCATTCAGCGCTACGCAGTGATCCCCCTATCCACCAACTCAGGCCTGATTGGCTGGGTGCCCCACTGTGACACCCTGCATGCCCTCATCAGAGactacagagagaagaaaaagattTTGCTCAACATTGAACACCGCATCATGCTCAGGATGGCCCCAGACTACGACCACCTGACGCTGATGGAGAAGGTGGAGGTGTTTGAACACGCCGTCAACAACACAGCTGGAGACGACCTGGCCAAGCTCTTGTGGCTGAAGAGCCCCAGCTCTGAGGTGTGGTTCGACAGGAGGACCAATTACACACGCTCCCTGGCTGTGATGTCCATGGTGGGATACATCCTCGGACTGGGTGACAGGCATCCATCCAACTTGATGTTAGATCGGTTAAGCGGCAAGATCCTCCACATTGACTTTGGAGACTGTTTTGAGGTTGCCATGACCAGAGAGAAGTTCCCTGAAAAGATCCCATTCAGACTGACGAGGATGCTGACCAACGCCATGGAGGTGACAGGCTTGGACGGTAACTACCGGATCACCTGCCACACAGTGATGGAGGTGCTGAGGGAGCACCGGGACAGTGTCATGGCTGTGCTGGAGGCCTTCGTCTACGACCCGCTGCTCAACTGGAGGCTCATGGACACAAACACCAAAGGCAACAAGCGCTCCCGCACCAGGACCGACTCGTACACTGCTGGACAGTCAGTGGAGGCTCTTGAGGGAATAGACCTGGGAGAGACCACACACAAGAAACCAGGGACCACCGTTCCTGAATCCATCCACTCCTTCAttgGAGACGGTTTGGTACAACCTGAGGCACTCAACAAGAAAGCCATTCAGATCATCAACAGAGTAAGAGACAAACTTACAGGTCGAGACTTTTCTCATGATGAGACACTGGATGTGGCAACACAAGTGGAGCTCCTCATCAAGCAGGCCACTTCACATGAAAACCTGTGCCAGTGCTACATTGGCTGgTGTCCATTTTGGTGAAGAATCGTCTCCGGCAGACAAAGTTACACTTGACATTTTTTCTCACTGGTAAACCAAGAAGAAGCACTCAAATACATGGATATCCACTGAAATATGTACTTAAGACACAGTGCTGAGCCTTTGTGAAATATATTCTTTTTGTTATTGTAATGATCCGATTTTCCGGTGGCATGTTTTAAGTTTATTAGAGAGTATCTTAAGAGCTCAGTTTTTACCTGATGATTATAATTTAACTTCCAATGACTTCCCTGGCTTTTAACGATACCACCATAATCACTTGCTAAAAGCTTTCTACGGAGGCCATATTGTAATTATGACATTTCTTACTTCACACACGCTGTATTAAAAACCCACTAGTCTCTTGTA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0008144 drug binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K07203 MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU72537 lncRNA downstream 87914 30008037 ~ 30015317 (-) False tafa5l
TU72525 lncRNA downstream 200511 29900560 ~ 29902720 (-) True G54272
TU72424 lncRNA downstream 280414 29822520 ~ 29822817 (-) True G54189
TU72420 lncRNA downstream 287781 29814350 ~ 29815450 (-) True G54185
XR_005639328.1 lncRNA downstream 424427 29676371 ~ 29678804 (-) True LOC120559594
XR_005639359.1 lncRNA upstream 296200 30496040 ~ 30500331 (-) True LOC120559738
XR_005639342.1 lncRNA upstream 419426 30619266 ~ 30619890 (-) True LOC120559660
TU72708 lncRNA upstream 434092 30633932 ~ 30635350 (-) True G54407
TU72718 lncRNA upstream 455830 30655670 ~ 30706761 (-) False G54414
TU72715 lncRNA upstream 504446 30704286 ~ 30706761 (-) True G54414
XM_039801583.1 mRNA downstream 37291 30008242 ~ 30065940 (-) False tafa5l
XM_039801582.1 mRNA downstream 37292 30008242 ~ 30065939 (-) False tafa5l
XM_039801700.1 mRNA downstream 143460 29947906 ~ 29959771 (-) True mapk13
XM_039800361.1 mRNA downstream 156998 29928188 ~ 29946233 (-) False brpf3b
XM_039800360.1 mRNA downstream 156998 29928188 ~ 29946233 (-) True brpf3b
XM_039801722.1 mRNA upstream 341661 30541501 ~ 30547082 (-) True LOC120559739
XM_039801727.1 mRNA upstream 363720 30563560 ~ 30585652 (-) False dennd2c
XM_039801724.1 mRNA upstream 363720 30563560 ~ 30585652 (-) False dennd2c
XM_039801725.1 mRNA upstream 363720 30563560 ~ 30585652 (-) False dennd2c
XM_039801726.1 mRNA upstream 363720 30563560 ~ 30585652 (-) True dennd2c
TU72538 other downstream 30532 29971196 ~ 30072699 (-) False tafa5l
XR_005639345.1 other downstream 37290 30008242 ~ 30065941 (-) False tafa5l
XR_005639344.1 other downstream 37290 30008242 ~ 30065941 (-) True tafa5l
XR_005639347.1 other downstream 37291 30008242 ~ 30065940 (-) False tafa5l
XR_005639346.1 other downstream 37291 30008242 ~ 30065940 (-) False tafa5l
unassigned_transcript_235 other upstream 1027220 31227060 ~ 31227131 (-) True trnaq-uug_1
TU73035 other upstream 2107082 32306922 ~ 32312778 (-) False LOC120558955
TU73036 other upstream 2117120 32316960 ~ 32321952 (-) False LOC120558955
TU73146 other upstream 2567517 32767357 ~ 32773486 (-) True G54756
TU73247 other upstream 2680353 32880193 ~ 32887290 (-) True G54834

Expression Profile