RNA id: XM_039799799.1


Basic Information

Item Value
RNA id XM_039799799.1
length 4335
RNA type mRNA
GC content 0.43
exon number 9
gene id znf362b
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25022625 ~ 25034515 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCTGCACTACTGAGCCTGCAGCAGCAACCAGAAGTGAACAAAGCGACCCGGAAGCGGTGGTCCGACTGGAGGCAGGCAGAAAGAACCTTTTATATTATAGCTGTACTCGCAAGACAATATCTGCAATCAGGACACAAGGATGGCAGAGCCTCGATTTAACAACCCGTATTTCTGGCCGCCCCCTCCATCCATGCCAGGCCAGCTGGATAACCTGGTGCTCATTAACAAGATCAAGGAGCAGCTGATGGCCGAGAAGATCCGACCCCTGCACCTGCCGCCTACCTCCACTCCTTCCCAGCAGTCTTTGCTGGTGCCCACCTCGTCCCCGGACGGTAGCGCTCAGCACGTCATGTCGGTGTCAAAGCCACAACAGGTGCAGGGCCATCACCAGCAGCCGCAGGGTTCTGGACAACCGGACATTGCTCTGCATGCTCGCCCTGCCTCCAGCTCTGGACCAGGTACAGCCTTCACTTGGTTGGTTGTTGGCCCAGATGGAAATATGGACGACAAGTCAGCAGTGAAGGCCAAAGGATTGTGGGAAGACTGGCACATGAGACAGCTCAGCGAGCAACAGGGCCGGCTCAACCATCGCTCAGGTTTGGCTCCTTCATCCCGACCCGACAGCCACAGCACCTCGGAGGCCCTGACCCCCACGACTCCAACCTCCAGCAGCCAGAACCGCCTGGGCGGTGCCCCCTCTGTGAACATCATCTCCGGGCTGGCTAGCGGTCCTGGCATGGACCACATGAAAGTTGGAGGCCTGGCTGGACTGTTGGGCCCCCCACCCAAGGCACCCCGGGGACGGAAGAAGATCAAAGCTGAAAACCCGACTGGTCCTCTGCTGGTGGTGCCCTACCCCATCCTAGCTGACCAAGGCTGTGTCACCGTGGCACCCAAAGAGGGCAAAACCTACAGATGCAAAGTGTGCCCGCTCACCTTCTTAACCAAGTCCGAGATGCAGATTCACTCCAAGTCCCACACGGAGGCCAAACCCCACAAGTGTCCCCACTGCTCCAAGACGTTCGCCAACGCCTCCTACCTGTCCCAGCACCTGCGCATCCACCTAGGGATCAAACCCTACCACTGCTCCTACTGCGAGAACTCCTTCCGTCAGCTGTCACACCTGCAGCAGCACACCAGAATCCACACTGGCGATAGGCCTTATAAATGTGCTCACCCCGGATGTGAAAAGGCTTTTACCCAGCTGTCTAACCTCCAGTCTCACCAGAGGCAGCACAATAAAGACAAGCCGTATAAATGTCCTAACTGCTACCGTGCCTACTCGGACTCTGCATCGTTGCAGATCCACTTGTCAGCGCACGCCATCAAAAACGCTAAGGCCTACTGCTGTAGCATGTGTGGCCGGGCATACACCTCAGAGACCTACCTTATGAAGCACATGTCCAAACATACGGTGGTGGAGCACCTAGTGAGCCACCAGTCGCCTCAGAGAACCGAGTCCCCCAGCATCCCCATACGCATCTCCCTCATCTGAGCCCCCAGCCTCTCAGCAGCAGGTTGGATTTAAAGTCTATGTTAGGCTGGAGCTTATGAGGCCCTGCACCCACAGCCATCTACATAAGGCTTACATTAGCATTATGACAGCTGACATAAGCATTCAGTGCTAGATTCAGTAAACAGGCTGCCTCCATCCATCTTGACACGGGCCGTCTGTCAAAAACGAGCACAGAGTTATTTTGTGAATGTAAAAATACAGCTAGATGTTGTCCGGAGGATCAAGTGGAAAGAATGTCTTGCGTCAGATTTAATAAGCACTTTCGTAAGCGTCATGTAAACTGCCGGATGCATTGGCCATCAGAAATGTTTTAGTtaggttccttttttttttttttctctttccatgAAATGGGTTTCCAAAATGTGCCAGATGATATTTGCCCTTATAAAGAATTGAGAgagtagaatttttttttttgctgggtGTATTCTGAAGACATccaaagaaatgttttaagCACTTTTAGGCCTTGTGGTTTTGGCTCAAATTGTTTCAATCTTGTTGGATGGAAAATGCCAAAGGGCATTACTTGTGGCAGCTAAGAGCACAGACTGTGTATAAATAACAGTCTTTTTCCTGTtactttctttgtttttactcACATTTTTTGTGAAAGTACTCATTGACAGGGTCATCTAAATTTGAAGAAAGGCAATCGGTAGATGacaatttaaacatttaatgatTGTATTAAGATGTTGCATTATTGACTTTGGGAGGCAAAAAGTAGAGCAACATGCAAGGGAAGAAGGATGAATGTTTTTCTTAGTTTAAAATCTTTCACTCCATATTTGACATTTACCTTCACGGCACCTTTATGATCATAACATTATGGCACCTTTATGATCATAACATATGATCAAAGAAACACTGCTTTTTACATTACCGTAAATTCTCAAATAGTGGCTGAGGCCTTTATTCACCTCAGCTGCAGAGGGCACCATGATGAATCTTTCTGACTGCATTATGTTGTTGATACAACACTCAACACTTCCTGCATCCATTTCAAATTAAAGGCGGCCATACCATGTAAACCATTGCAGCGGTAATATCTCAATCatcattattaaaatgtcagTATAGCATCAGCTTATTCATTTATAGAGCTCATATTGAAACAGACTTTTAACAACTTCACAATTCAGCATAAAATGATGGTAAACTGTCATTAGCAGAGGGATCGATGGCAGAAGAAGTTTAGAAAGGAGTTGAGATTCTACAGATTGCGATGCCGAGTGCAAAAATAACACAATCAGTAAAATTGGCAAACAACCTAAAAACAAGGTTTTATTATAAGGTTATGTTCCTCACCCTATTTTTTTATCTCCTCATCATATCACCTGCAGCCATCTCTAGATAACTGTGTGTATGGTCTGAAGTATGCCTGAGGTGCACTTTCTCCAGTAACCAGTTAGTGTGTAAGAAATGGCTCATGCTTAGTTTTTGTAGGTTCACGTCATTTATACATGTGGCTCCAGGAATCTATCCACccgtgtttgttttttttcttccagcctGTATTTGGGGCCTGTATTTGTCCATGGCGACCACACCCCCAGCTTCTATTTAAGAATTTACGGTATGTTTTCCACACGTCCCATTTTAACTAGTGCCATATATAAACCTTGTTGAGGTTTTAATAGAAAGCTGAACTTGTTACAGTGCGTGTCTGCTTTCTCCACTCAGTTAAGCTTTGACTATTAGTTATTATAAGTATTAGAGGTTGAATACATTGCACATGTATCAGTGCCAGCTCTACTCTACTCAGCCCTACTTTTAAACACACTCAAGCGGAAATTAGATTTTACTTGAGTGGTCAATTTTAAACCCAAACTTTGGACCAAAATGTGAAGTTATTGTACAGCTACTCTGACCCAgttaagtatttaaaaaaaaaactttaataagCTTTATCCATTTGGAATAAACTGCAGTATAAGTCATATTCCATATGCTTATGATATGAGTTGatgcttctctttttttaatgtttttttcttttctccttagtattgtttttattgtacacggtattgtttgttgtatttttactGTAACTTTTAACCTCTGGATGGTACTAATAGAGTACCCTGTATTCTTCAGGGCACTTCAGAAAAGGTGCTACGGCTAGACATTATGTTTGAGATGGAACTGAGAATAATGtaaaatacatatacagtatatagtatgttttcaaaagaataaaaaaaacttattaCTCAAGCCACTGGCCGGAAAACAGACATTTACGCCAACAACAGACCCTGCCTCCTCAACTTACTCTCTCTTTTGAGATAATGGGAAAATGTACATGTTGCTGTACTGTAAAACATGTTACTCATTTATAGTACCtattttttagttttcataAACATGCTCTGTTTGGGTTTTGTAAAGGTTTATGTATGAACTTACTGTAATTATTTTAGTTACCCATATGTTATTAATATCCATGTTTTATATCAGTTAATTACATGTACGCCTTAACTGTTTTATCATCCCATTTCCATTACTCTGTATTGTGTTCTGCAGTATTCAGTcgtgtaaacattttcattttttccttCCGCATGGAGTTCCTGAGCTGTAATCTGTATGATAACTGTTTAACCCATGTTCTCTATGAAAAGATATTGCGTAGATTTATTACACTTTTTCCTGTCTTGCATTGTGGTTTCATATACAGTTTCTAGACAACTAAATATGCACAGCCAAGACTGAGAAGTTAAACTAAGGTtatcaatgtttaaaaaaaaaaaaaggaaaaaaagctttGTATCTTTACCTTGTTTAATAAACAGACTGTTATAAATTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639163.1 lncRNA upstream 7228 25009989 ~ 25015398 (+) True LOC120558677
TU70673 lncRNA upstream 62523 24959816 ~ 24960103 (+) True G52892
TU70634 lncRNA upstream 77475 24940795 ~ 24945151 (+) False LOC120559118
TU70635 lncRNA upstream 77475 24942240 ~ 24945151 (+) True LOC120559118
TU70586 lncRNA upstream 269446 24751895 ~ 24753180 (+) True G52827
TU70912 lncRNA downstream 775198 25809713 ~ 25811047 (+) True G53056
XR_005639231.1 lncRNA downstream 960718 25995233 ~ 25997094 (+) True LOC120559215
TU70971 lncRNA downstream 1037070 26071585 ~ 26076664 (+) False G53096
TU70974 lncRNA downstream 1037070 26071585 ~ 26076664 (+) True G53096
TU70988 lncRNA downstream 1061844 26096359 ~ 26099635 (+) True G53109
XM_039799789.1 mRNA upstream 23071 24990894 ~ 24999555 (+) True alas2
XM_039800575.1 mRNA upstream 77306 24940795 ~ 24945320 (+) False LOC120559118
XM_039800572.1 mRNA upstream 102860 24838584 ~ 24919766 (+) False LOC120559115
XM_039799807.1 mRNA downstream 20622 25055137 ~ 25058398 (+) True LOC120558682
XM_039799805.1 mRNA downstream 23945 25058460 ~ 25065176 (+) True zmynd12
XM_039799806.1 mRNA downstream 24109 25058624 ~ 25065176 (+) False zmynd12
XM_039799809.1 mRNA downstream 54390 25088905 ~ 25154501 (+) True LOC120558685
XM_039799810.1 mRNA downstream 54390 25088905 ~ 25154501 (+) False LOC120558685
TU70648 other upstream 65296 24953442 ~ 24957330 (+) True G52871
TU70197 other upstream 1257473 23759234 ~ 23765153 (+) False tmem201
TU69870 other upstream 2175688 22842066 ~ 22846938 (+) False lamtor5
XR_005639388.1 other upstream 2460105 22562154 ~ 22562521 (+) True LOC120559933
TU69718 other upstream 2462298 22556329 ~ 22560328 (+) True G52210
TU70864 other downstream 709095 25743610 ~ 25748317 (+) True tprg1l
TU70970 other downstream 1037070 26071585 ~ 26076664 (+) False G53096
TU71155 other downstream 1317945 26352460 ~ 26353463 (+) True G53232
XR_005639211.1 other downstream 1345161 26379676 ~ 26382295 (+) True LOC120559113
XR_005639212.1 other downstream 1345161 26379676 ~ 26382295 (+) False LOC120559113

Expression Profile