RNA id: TCONS_00007205



Basic Information


Item Value
RNA id TCONS_00007205
length 966
RNA type processed_transcript
GC content 0.56
exon number 3
gene id XLOC_003732
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 44324761 ~ 44335322 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


gtgcaggtgtgtggCGGCGAGCGTCCCTACATGTCTCCGTCTGCTCTGGATCTCCGCCATGGTGAGctgaagcaggtgtgtgtgtgtcagttccGCTCCGTCAAGAAGATGGGTGGAGAAGAGTTCAGCCGACGCTACCAGGAGCAGCTGGAGCAGGAGCTGGAGGAGTGCTACGCTAGCTTTAGCAAACACAACCAGGGCAAGAACATCTTTCTAGCGGCGCGTACGCCGGCGGCGCTGCTCGCCCTGATGCTGCTGCTGTACGCGTCGGCGCTGATAGCGGGCTGTGTGGGCATCAGTACACTAGCGGTGCTCTGTGACCTGCTGCTAGCCGCCGCGCTGCTCTCGCTCTGCGTCTGGACCTACAGCAGATACTCCGGAGAGTTCCGCGAGATCGGCGCCGCCATCGACCGTCTGGCCGAGACACTCTGGGAGCAGAGGACGCCCAGGAAGGTCCTCTCCAAGCTGATGGAGGTGTTGCGGAGCCGGCTGCGGCTGAAGCCCACCCCCAGACAGAGACTGCCCTCCAATAACAACCTCAAGAAGAGGAAGTAGATCCGCGTCTGCGCTGACGTCACTTCCTGCAGACGCTGAGCGCCAGCAGTGCTACGGTAACACTAGCGGCGTTAGCAGAGCTAGCGCTGAACTCAGAGACTCTCTGCTGCTGCGCTCCTCCACCCATCCACACGCTGATCTCTGTACAGATTTTAAACTCCAGCATGACCATCCACAGCGTTTTCTACACGCTGCTTTTGTAGCAGGACAAACCATGGAGTCATCCTCATCTGCAGgactaccacacacacacacacacacacacacacacacacacacacacacacacacttagtttTATACGTCTCCATTCCTCTGCTCTGAGCTTCATCATTCCGGAATGTTCAGTCGTCTTCATCATGatgtttctttaatttattttggaatttGATTAAAATGGGTCACTGTACA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000173122

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008701 lncRNA upstream 10640 44317203 ~ 44318134 (+) False XLOC_003731
TCONS_00008702 lncRNA upstream 10640 44317208 ~ 44318134 (+) True XLOC_003731
TCONS_00008700 lncRNA upstream 14364 44311334 ~ 44314410 (+) True XLOC_003730
TCONS_00008699 lncRNA upstream 25733 44301985 ~ 44303041 (+) True XLOC_003729
TCONS_00008430 lncRNA upstream 90247 44226200 ~ 44238527 (+) False XLOC_003728
TCONS_00008703 lncRNA downstream 33805 44369127 ~ 44375182 (+) True XLOC_003735
TCONS_00008433 lncRNA downstream 49602 44384924 ~ 44386217 (+) False XLOC_003736
TCONS_00008704 lncRNA downstream 50476 44385798 ~ 44391541 (+) True XLOC_003736
TCONS_00008705 lncRNA downstream 59013 44394335 ~ 44399370 (+) False XLOC_003737
TCONS_00008434 lncRNA downstream 60095 44395417 ~ 44396163 (+) True XLOC_003737
TCONS_00007202 mRNA upstream 19742 44300548 ~ 44309032 (+) False XLOC_003729
TCONS_00007199 mRNA upstream 190503 44135351 ~ 44138271 (+) True XLOC_003726
TCONS_00007197 mRNA upstream 541621 43751263 ~ 43787153 (+) True XLOC_003721
TCONS_00007196 mRNA upstream 585072 43740949 ~ 43743702 (+) True XLOC_003720
TCONS_00007195 mRNA upstream 615024 43661735 ~ 43713750 (+) True XLOC_003719
TCONS_00007207 mRNA downstream 21182 44356504 ~ 44363031 (+) False XLOC_003734
TCONS_00007208 mRNA downstream 21385 44356707 ~ 44363032 (+) True XLOC_003734
TCONS_00007209 mRNA downstream 167088 44502410 ~ 44515880 (+) False XLOC_003739
TCONS_00007210 mRNA downstream 168452 44503774 ~ 44524932 (+) True XLOC_003739
TCONS_00007213 mRNA downstream 212887 44548209 ~ 44603789 (+) False XLOC_003741
TCONS_00007203 other upstream 2482 44324761 ~ 44326292 (+) False XLOC_003732
TCONS_00007198 other upstream 303896 44024762 ~ 44024878 (+) True XLOC_003725
TCONS_00007182 other upstream 1283825 43044826 ~ 43044949 (+) True XLOC_003709
TCONS_00007172 other upstream 1703287 42625371 ~ 42625487 (+) True XLOC_003703
TCONS_00007149 other upstream 2863538 41465107 ~ 41465236 (+) True XLOC_003680
TCONS_00007206 other downstream 344 44335666 ~ 44335780 (+) True XLOC_003733
TCONS_00007223 other downstream 516152 44851474 ~ 44851593 (+) True XLOC_003747
TCONS_00007247 other downstream 1052876 45388198 ~ 45393530 (+) False XLOC_003764
TCONS_00007249 other downstream 1052888 45388210 ~ 45392663 (+) False XLOC_003764
TCONS_00007251 other downstream 1056889 45392211 ~ 45394780 (+) False XLOC_003764

Expression Profile


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