Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039801838.1 |
| length | 865 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 5 |
| gene id | LOC120559811 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 33955326 ~ 33963940 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU73600 | lncRNA | downstream | 2668 | 33952265 ~ 33952658 (-) | True | G55119 |
| TU73569 | lncRNA | downstream | 3644 | 33865954 ~ 33951682 (-) | True | G55093 |
| TU73568 | lncRNA | downstream | 5317 | 33916095 ~ 33950009 (-) | True | G55092 |
| XR_005639136.1 | lncRNA | downstream | 79906 | 33857451 ~ 33875420 (-) | True | LOC120558540 |
| TU73523 | lncRNA | downstream | 123767 | 33831049 ~ 33831559 (-) | True | G55050 |
| TU73615 | lncRNA | upstream | 119094 | 34080058 ~ 34081936 (-) | True | G55128 |
| TU73623 | lncRNA | upstream | 136543 | 34097507 ~ 34107307 (-) | True | G55133 |
| TU73609 | lncRNA | upstream | 156940 | 34117904 ~ 34122520 (-) | True | G55124 |
| TU73611 | lncRNA | upstream | 156940 | 34117904 ~ 34127495 (-) | False | G55124 |
| TU73627 | lncRNA | upstream | 167274 | 34128238 ~ 34128796 (-) | True | G55137 |
| XM_039799669.1 | mRNA | downstream | 190722 | 33763783 ~ 33764604 (-) | True | taf13 |
| XM_039800458.1 | mRNA | downstream | 223854 | 33730330 ~ 33731472 (-) | True | LOC120559034 |
| XM_039799262.1 | mRNA | downstream | 244559 | 33696847 ~ 33710767 (-) | True | si:rp71-17i16.5 |
| XM_039801161.1 | mRNA | downstream | 285687 | 33619197 ~ 33669639 (-) | False | lamb2l |
| XM_039801163.1 | mRNA | downstream | 307461 | 33618623 ~ 33647865 (-) | False | lamb2l |
| XM_039801847.1 | mRNA | upstream | 173295 | 34134259 ~ 34165964 (-) | False | snphb |
| XM_039801846.1 | mRNA | upstream | 173295 | 34134259 ~ 34165964 (-) | True | snphb |
| XM_039799249.1 | mRNA | upstream | 275602 | 34236566 ~ 34291069 (-) | True | ntsr1 |
| XM_039799951.1 | mRNA | upstream | 372634 | 34333598 ~ 34375503 (-) | False | slco4a1 |
| XM_039799952.1 | mRNA | upstream | 372634 | 34333598 ~ 34375503 (-) | True | slco4a1 |
| TU73247 | other | downstream | 1068036 | 32880193 ~ 32887290 (-) | True | G54834 |
| TU73146 | other | downstream | 1181840 | 32767357 ~ 32773486 (-) | True | G54756 |
| TU73036 | other | downstream | 1633374 | 32316960 ~ 32321952 (-) | False | LOC120558955 |
| TU73035 | other | downstream | 1642548 | 32306922 ~ 32312778 (-) | False | LOC120558955 |
| unassigned_transcript_235 | other | downstream | 2728195 | 31227060 ~ 31227131 (-) | True | trnaq-uug_1 |
| TU73607 | other | upstream | 63054 | 34024018 ~ 34127495 (-) | False | G55124 |
| TU73620 | other | upstream | 127006 | 34087970 ~ 34093118 (-) | True | G55131 |
| TU73610 | other | upstream | 156940 | 34117904 ~ 34127495 (-) | False | G55124 |
| TU73658 | other | upstream | 329442 | 34290406 ~ 34290887 (-) | False | ntsr1 |
| XR_005639223.1 | other | upstream | 1308934 | 35269898 ~ 35277854 (-) | True | LOC120559165 |
