RNA id: unassigned_transcript_237



Basic Information


Item Value
RNA id unassigned_transcript_237
length 73
RNA type tRNA
GC content 0.52
exon number 1
gene id trnak-uuu_8
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40940854 ~ 40940926 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gcctggatagctcagtcggtagagcatCAGACTTTTAATCTGAgggtccagggttcaagtcccTGTTCAGGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76609 lncRNA downstream 1361 40927305 ~ 40939493 (-) True G57038
TU76722 lncRNA downstream 21528 40911288 ~ 40919326 (-) True G57128
TU76608 lncRNA downstream 38034 40794659 ~ 40902820 (-) True G57037
TU76721 lncRNA downstream 50951 40888417 ~ 40889903 (-) True G57127
TU76718 lncRNA downstream 89575 40841045 ~ 40851279 (-) False G57125
TU76588 lncRNA upstream 29062 40969988 ~ 40978899 (-) True G57029
TU76733 lncRNA upstream 71147 41012073 ~ 41110667 (-) False G57134
TU76614 lncRNA upstream 92565 41033491 ~ 41080704 (-) True G57043
TU76731 lncRNA upstream 103604 41044530 ~ 41071265 (-) False G57134
XR_005639363.1 lncRNA upstream 113179 41054105 ~ 41054885 (-) True LOC120559792
XM_039801396.1 mRNA downstream 104645 40777034 ~ 40836209 (-) True LOC120559573
XM_039801035.1 mRNA downstream 271511 40660809 ~ 40669343 (-) True LOC120559369
XM_039801033.1 mRNA downstream 293082 40637691 ~ 40647772 (-) True LOC120559368
XM_039801034.1 mRNA downstream 293097 40637691 ~ 40647757 (-) False LOC120559368
XM_039801036.1 mRNA downstream 338764 40598805 ~ 40602090 (-) True LOC120559370
XM_039800728.1 mRNA upstream 187375 41128301 ~ 41137726 (-) False LOC120559188
XM_039800495.1 mRNA upstream 224929 41165855 ~ 41199134 (-) True LOC120559074
XM_039799676.1 mRNA upstream 355154 41296080 ~ 41707346 (-) False LOC120558615
XM_039799675.1 mRNA upstream 355154 41296080 ~ 41707346 (-) True LOC120558615
XM_039799674.1 mRNA upstream 355154 41296080 ~ 41313319 (-) False LOC120558615
TU76612 other downstream 36930 40834098 ~ 40903924 (-) True G57041
TU76607 other downstream 56248 40877882 ~ 40884606 (-) True G57036
TU76679 other downstream 278968 40661025 ~ 40661886 (-) False LOC120559369
TU76071 other downstream 1326617 39550498 ~ 39614237 (-) True G56721
TU76067 other downstream 1406214 39509552 ~ 39534640 (-) False plxna3
unassigned_transcript_238 other upstream 4529 40945455 ~ 40945527 (-) True trnak-uuu_9
unassigned_transcript_239 other upstream 7603 40948529 ~ 40948601 (-) True trnak-uuu_10
unassigned_transcript_240 other upstream 10597 40951523 ~ 40951595 (-) True trnak-uuu_11
TU76730 other upstream 79554 41020480 ~ 41078750 (-) False G57134
TU76729 other upstream 129437 41070363 ~ 41078750 (-) True G57134