RNA id: TU77921


Basic Information

Item Value
RNA id TU77921
length 362
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G57961
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15528 ~ 16917 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacccacacacacacacacacacacacacacatacacacacacacacacacacacacacacaaacacacacagacacacacacacacacacacacacacacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639491.1 lncRNA downstream 91649 108566 ~ 110061 (+) True LOC120560560
TU77970 lncRNA downstream 104930 121847 ~ 126263 (+) True G57994
TU77979 lncRNA downstream 149101 166018 ~ 603180 (+) True G57999
TU77996 lncRNA downstream 192364 209281 ~ 210676 (+) True G58011
XR_005639514.1 lncRNA downstream 193839 210756 ~ 212383 (+) False LOC120560799
XM_039803187.1 mRNA downstream 62715 79632 ~ 99504 (+) False LOC120560558
XM_039803190.1 mRNA downstream 62715 79632 ~ 99504 (+) False LOC120560558
XM_039803189.1 mRNA downstream 62715 79632 ~ 99504 (+) False LOC120560558
XM_039803188.1 mRNA downstream 62874 79791 ~ 99504 (+) True LOC120560558
XM_039802738.1 mRNA downstream 166760 183677 ~ 187344 (+) True ccdc157
TU78000 other downstream 193825 210742 ~ 212370 (+) True LOC120560799
TU78001 other downstream 193825 210742 ~ 212370 (+) False LOC120560799
TU78941 other downstream 2861484 2878401 ~ 2879744 (+) False lman2lb
TU79382 other downstream 4100362 4117279 ~ 4117631 (+) True G59086
TU79482 other downstream 4407224 4424141 ~ 4429981 (+) True G59172

Expression Profile