RNA id: TU79181



Basic Information


Item Value
RNA id TU79181
length 320
lncRNA type inter_gene
GC content 0.59
exon number 2
gene id G58922
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3435212 ~ 3467122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCGCTGCAGGTTGACTGTGTACTGCTCCCAGACCATCTCCTCCATCCCTGAGCTTCCGACATTTTCGCTCTTGCTCGGGTAAGAGGCCAGTCTTCCTCCGCCTTTCACCGCCGGCATCCTGCTTCTCCTCGGCTCGGCTGGACAGGACAGCAGCTGTGGCGTCGCGGTTAAACCCAGAGCCGTGTGGATTCAGACGGTCGTTAGCGTAGCCTGGGCtagttttttaaaatgaaacataTCTTAGTGACAGCCACAGTGCTCCGCCCCTCCTCGCAGTCAGGCTGGGTTCCTCCAGGCGGACAGCCTACTGGAGCCAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU79098 lncRNA downstream 188815 3246081 ~ 3246397 (-) True G58852
TU79087 lncRNA downstream 195149 3233525 ~ 3240063 (-) False si:ch211-102c2.4
TU79091 lncRNA downstream 195149 3233525 ~ 3240063 (-) True si:ch211-102c2.4
TU79088 lncRNA downstream 201551 3232606 ~ 3233661 (-) False si:ch211-102c2.4
TU79048 lncRNA downstream 273085 3161885 ~ 3162127 (-) True G58818
TU79190 lncRNA upstream 20841 3487963 ~ 3488550 (-) True G58931
TU79191 lncRNA upstream 22683 3489805 ~ 3490230 (-) True G58932
TU79192 lncRNA upstream 23598 3490720 ~ 3492557 (-) True G58933
TU79194 lncRNA upstream 29122 3496244 ~ 3496596 (-) True G58935
TU79196 lncRNA upstream 38552 3505674 ~ 3505974 (-) True G58937
XM_039804424.1 mRNA downstream 80265 3315816 ~ 3354947 (-) False LOC120561346
XM_039804427.1 mRNA downstream 80368 3315816 ~ 3354844 (-) False LOC120561346
XM_039804426.1 mRNA downstream 80368 3315816 ~ 3354844 (-) False LOC120561346
XM_039804425.1 mRNA downstream 80368 3315816 ~ 3354844 (-) False LOC120561346
XM_039804422.1 mRNA downstream 80368 3315816 ~ 3354844 (-) True LOC120561346
XM_039803135.1 mRNA upstream 87951 3555073 ~ 3603158 (-) False apba1a
XM_039803136.1 mRNA upstream 87951 3555073 ~ 3589853 (-) True apba1a
XM_039803137.1 mRNA upstream 139273 3606395 ~ 3621480 (-) False ptar1
XM_039803139.1 mRNA upstream 139273 3606395 ~ 3621444 (-) True ptar1
XM_039804159.1 mRNA upstream 331910 3799032 ~ 3816820 (-) False pias2
TU79177 other downstream 18358 3415627 ~ 3416854 (-) True G58920
TU79176 other downstream 37716 3397169 ~ 3397496 (-) True G58919
TU78857 other downstream 742690 2690610 ~ 2692522 (-) False LOC120561394
TU78855 other downstream 746363 2686676 ~ 2688849 (-) False si:ch211-107p11.3
XR_005639531.1 other downstream 842466 2577875 ~ 2592746 (-) False ggt1a
TU79274 other upstream 221507 3688629 ~ 3689338 (-) True G58994
TU79517 other upstream 957068 4424190 ~ 4430041 (-) False sub1b
TU79519 other upstream 965722 4432844 ~ 4435068 (-) False LOC120560375
TU79521 other upstream 965722 4432844 ~ 4436316 (-) False LOC120560375
TU79518 other upstream 966003 4433125 ~ 4435068 (-) False LOC120560375

Expression Profile