RNA id: TU79196



Basic Information


Item Value
RNA id TU79196
length 301
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G58937
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3505674 ~ 3505974 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CAGTGAATAAGTGAGAGCAGGTCTTCCTCAGTTTGACGGCCTGTTCGTACAGTTTGCGGGCACTGCGGTTGGAGTTGGGGGCGATCCTCTGTCTCAGGGCCTTGATGCCGTGCTTGCTGTCGGGGTTGAAGAAGATGACGATGGGGTACCACTGGGTGTAGTTCAGGGTGTCCACTGCCTTGGGTGTCACATCCAGCAGGGCGTGCTTGTCCTGTGTGGTGTGAGGAATGGGGAAGATTGTTAATGCTTTGGATCAGATCACAGTGCAGAGCGTCTCATCGTTCTGCAATGTGTCTCTTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU79194 lncRNA downstream 9078 3496244 ~ 3496596 (-) True G58935
TU79192 lncRNA downstream 13117 3490720 ~ 3492557 (-) True G58933
TU79191 lncRNA downstream 15444 3489805 ~ 3490230 (-) True G58932
TU79190 lncRNA downstream 17124 3487963 ~ 3488550 (-) True G58931
TU79181 lncRNA downstream 38552 3435212 ~ 3467122 (-) True G58922
TU79197 lncRNA upstream 1784 3507758 ~ 3508402 (-) True G58938
TU79198 lncRNA upstream 7657 3513631 ~ 3514141 (-) True G58939
TU79199 lncRNA upstream 15213 3521187 ~ 3522756 (-) True G58940
TU79201 lncRNA upstream 16872 3522846 ~ 3523604 (-) True G58942
TU79202 lncRNA upstream 18409 3524383 ~ 3524585 (-) True G58943
XM_039804424.1 mRNA downstream 150727 3315816 ~ 3354947 (-) False LOC120561346
XM_039804427.1 mRNA downstream 150830 3315816 ~ 3354844 (-) False LOC120561346
XM_039804426.1 mRNA downstream 150830 3315816 ~ 3354844 (-) False LOC120561346
XM_039804425.1 mRNA downstream 150830 3315816 ~ 3354844 (-) False LOC120561346
XM_039804422.1 mRNA downstream 150830 3315816 ~ 3354844 (-) True LOC120561346
XM_039803135.1 mRNA upstream 49099 3555073 ~ 3603158 (-) False apba1a
XM_039803136.1 mRNA upstream 49099 3555073 ~ 3589853 (-) True apba1a
XM_039803137.1 mRNA upstream 100421 3606395 ~ 3621480 (-) False ptar1
XM_039803139.1 mRNA upstream 100421 3606395 ~ 3621444 (-) True ptar1
XM_039804159.1 mRNA upstream 293058 3799032 ~ 3816820 (-) False pias2
TU79177 other downstream 88820 3415627 ~ 3416854 (-) True G58920
TU79176 other downstream 108178 3397169 ~ 3397496 (-) True G58919
TU78857 other downstream 813152 2690610 ~ 2692522 (-) False LOC120561394
TU78855 other downstream 816825 2686676 ~ 2688849 (-) False si:ch211-107p11.3
XR_005639531.1 other downstream 912928 2577875 ~ 2592746 (-) False ggt1a
TU79274 other upstream 182655 3688629 ~ 3689338 (-) True G58994
TU79517 other upstream 918216 4424190 ~ 4430041 (-) False sub1b
TU79519 other upstream 926870 4432844 ~ 4435068 (-) False LOC120560375
TU79521 other upstream 926870 4432844 ~ 4436316 (-) False LOC120560375
TU79518 other upstream 927151 4433125 ~ 4435068 (-) False LOC120560375

Expression Profile