RNA id: TU79595



Basic Information


Item Value
RNA id TU79595
length 270
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G59241
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4625038 ~ 4625307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ACACAAACCTGCAGCATATACAATATAAAGTAATTCATAGGACTCACATCACCCAAAGTAAAATGTTCAAAATGGGCCTAGCAAACACAGGTATCTGTTCACAATGCACCTTAGGTAGCACAGGCGATTATCTACACGCCATGTGGCTCTGTCAACCAGTTCATTCATTCTGGATCACAGTCACCGAGACACTGTCCACCACCCTGAGCTACAGAATCCCATCTTCTCCAACACTCTGTCTCCTTGGTGATATCTCCGAAATCCACATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639407.1 lncRNA downstream 67425 4548725 ~ 4557613 (-) True LOC120560046
TU79528 lncRNA downstream 163967 4454690 ~ 4461071 (-) True G59207
TU79515 lncRNA downstream 211057 4413759 ~ 4413981 (-) True G59197
TU79437 lncRNA downstream 413201 4209756 ~ 4211837 (-) False golph3a
TU79397 lncRNA downstream 437566 4187261 ~ 4187472 (-) True G59101
TU79627 lncRNA upstream 10601 4635908 ~ 4704273 (-) True G59268
TU79649 lncRNA upstream 107323 4732630 ~ 4842143 (-) True G59287
TU79654 lncRNA upstream 112742 4738049 ~ 4741131 (-) True G59290
TU79690 lncRNA upstream 323964 4949271 ~ 4949523 (-) True G59312
TU79692 lncRNA upstream 379659 5004966 ~ 5005663 (-) False G59314
XM_039802398.1 mRNA downstream 81152 4531968 ~ 4543886 (-) False dph7
XM_039802397.1 mRNA downstream 81179 4531968 ~ 4543859 (-) False dph7
XM_039802393.1 mRNA downstream 81179 4531968 ~ 4543859 (-) False dph7
XM_039802396.1 mRNA downstream 81179 4531968 ~ 4543859 (-) False dph7
XM_039802394.1 mRNA downstream 81179 4531968 ~ 4543859 (-) True dph7
XM_039802039.1 mRNA upstream 13797 4639104 ~ 4642738 (-) True LOC120559971
XM_039803161.1 mRNA upstream 19297 4644604 ~ 4695210 (-) True si:ch211-158d24.2
XM_039804076.1 mRNA upstream 134809 4760116 ~ 4866975 (-) True galnt9
XM_039804077.1 mRNA upstream 134809 4760116 ~ 4781711 (-) False galnt9
XM_039804080.1 mRNA upstream 134809 4760116 ~ 4781568 (-) False galnt9
TU79521 other downstream 188722 4432844 ~ 4436316 (-) False LOC120560375
TU79519 other downstream 189970 4432844 ~ 4435068 (-) False LOC120560375
TU79518 other downstream 189970 4433125 ~ 4435068 (-) False LOC120560375
TU79517 other downstream 194997 4424190 ~ 4430041 (-) False sub1b
TU79274 other downstream 935700 3688629 ~ 3689338 (-) True G58994
XR_005639605.1 other upstream 840916 5466223 ~ 5466437 (-) True LOC120561493
XR_005639606.1 other upstream 966275 5591582 ~ 5591708 (-) False LOC120561494
TU79960 other upstream 1800899 6426206 ~ 6426786 (-) False G59521
TU79962 other upstream 1800899 6426206 ~ 6426811 (-) True G59521
TU79959 other upstream 1800943 6426250 ~ 6426786 (-) False G59521

Expression Profile