RNA id: TU79766



Basic Information


Item Value
RNA id TU79766
length 337
lncRNA type sense_over
GC content 0.64
exon number 2
gene id G59373
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 5435419 ~ 5453895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGCTGTCCCTGCGGCTGCGAGGCTCCGCCGTCCCTTCTCTCTCCCGCTCCAGCTCCAGCAGGTGCTGCTCTTCGCTGGCTgcctgcagcacctcctgcagGGAGGGGAACTGACCCATGGCCTCGGGGGCAATCTCCCTCCCCTCCACCGTGTAGGGCACCAGCTGCCTTTCCACTGCTGCCGAGAGCATCCCGACTGTCCCCCTGGTAGACACACTGCTGTAGGACGAGCTGTCGCTGTCGTTGCCGTCATTCCCCGGCCTTGTTCCCGATTCACTGCCGTCAATTTCGGAGAGATTGTCCACGACTTGGAGCAAAGCACCAGGCTGTACCTCGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU79692 lncRNA downstream 429756 5004966 ~ 5005663 (-) False G59314
TU79693 lncRNA downstream 429756 5004966 ~ 5005663 (-) False G59314
TU79694 lncRNA downstream 429756 5004966 ~ 5005663 (-) True G59314
TU79696 lncRNA downstream 430076 5004966 ~ 5005343 (-) False G59314
TU79690 lncRNA downstream 485896 4949271 ~ 4949523 (-) True G59312
TU79783 lncRNA upstream 13440 5467335 ~ 5515364 (-) True G59388
TU79804 lncRNA upstream 135678 5589573 ~ 5591810 (-) True LOC120561494
XR_005639428.1 lncRNA upstream 175221 5629116 ~ 5633186 (-) True LOC120560122
TU79818 lncRNA upstream 175228 5629123 ~ 5630066 (-) False LOC120560122
TU79871 lncRNA upstream 176855 5630750 ~ 5631797 (-) True G59437
XM_039804076.1 mRNA downstream 568444 4760116 ~ 4866975 (-) True galnt9
XM_039804077.1 mRNA downstream 653708 4760116 ~ 4781711 (-) False galnt9
XM_039804080.1 mRNA downstream 653851 4760116 ~ 4781568 (-) False galnt9
XM_039804078.1 mRNA downstream 653992 4760116 ~ 4781427 (-) False galnt9
XM_039804079.1 mRNA downstream 654000 4760116 ~ 4781419 (-) False galnt9
XM_039802580.1 mRNA upstream 34861 5488756 ~ 5498896 (-) False pgam5
XM_039802579.1 mRNA upstream 34861 5488756 ~ 5498896 (-) False pgam5
XM_039802577.1 mRNA upstream 34861 5488756 ~ 5498895 (-) False pgam5
XM_039802576.1 mRNA upstream 34861 5488756 ~ 5498895 (-) True pgam5
XM_039802585.1 mRNA upstream 136679 5590574 ~ 5594904 (-) True ranbp1
TU79521 other downstream 999103 4432844 ~ 4436316 (-) False LOC120560375
TU79519 other downstream 1000351 4432844 ~ 4435068 (-) False LOC120560375
TU79518 other downstream 1000351 4433125 ~ 4435068 (-) False LOC120560375
TU79517 other downstream 1005378 4424190 ~ 4430041 (-) False sub1b
TU79274 other downstream 1746081 3688629 ~ 3689338 (-) True G58994
XR_005639605.1 other upstream 12328 5466223 ~ 5466437 (-) True LOC120561493
XR_005639606.1 other upstream 137687 5591582 ~ 5591708 (-) False LOC120561494
TU79960 other upstream 972311 6426206 ~ 6426786 (-) False G59521
TU79962 other upstream 972311 6426206 ~ 6426811 (-) True G59521
TU79959 other upstream 972355 6426250 ~ 6426786 (-) False G59521

Expression Profile