RNA id: TU80145



Basic Information


Item Value
RNA id TU80145
length 767
RNA type TUCP
GC content 0.55
exon number 3
gene id add2
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 6969119 ~ 6996856 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GAGCCGGGCCTATATCCAACTAAACAATGTTTTAGGAGACAGCCTTAGATATCCAGCGGGGCTGTACGTTATATGTATGCCTTTTATAAACAATAACTAAGCGCAGTGCAAAGAGTGATCCCCACTGTGGGTGTGTGAGCGGGAGCCCTTGGGTGTCAGACTGTGGACAGGCGTGGCAGTGGGCTGGTCCAGGCGCACCGAGCGATGAAAAACATCAGGATCCATTGACTTGGTACCAGCTGAGGCCCTGGAATAGTCTGACAAAGGAACCCCAGTGTCGCAAGCCAAACGGTGACCGATTCGTTGTAATTAACTACATCTGCTTCTTCCGAGGACGGATGTGGGTGTGCCGCACCCACACAGAAGACACGGTCCTGAGGATGGTGCACTGAGTTATCCAAACCCACCCCTGGTTGGAAGACATCAACTGCAAAACAGTAGAAGATGAGCAAGTCGCCCACCCCCAAAGGCACCCCGGTGCAGCGCAGCCCCAGTGATGGGCTCCCTGAGGGCCTCCTGTCTCCTCAACATTCCACACCCAGCTCCGGACCCCAGCATAAGAAGCGCATCTCCAGCCTCCTCCAGAGTCCgtcaTTCAGGGAGGAGCTGGATGTGCTGATCCAGGAACAGATGAAGAAGGGTGGCAGCTCATCCAACCTATGGGCACTGAGACAGCTGGCTGATTTCATGGCCTCGCACGGCGCCCCGGCCGCCCTGCCCGTCACCCCTTCTAGTACGtacacaagactttcaaataaatctccaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU80085 lncRNA upstream 153627 6815248 ~ 6815506 (+) True G59627
TU79989 lncRNA upstream 227844 6741041 ~ 6741289 (+) True G59543
TU79990 lncRNA upstream 228205 6740664 ~ 6740928 (+) True G59544
TU79954 lncRNA upstream 634342 6334494 ~ 6334791 (+) True G59516
TU79953 lncRNA upstream 634919 6333979 ~ 6334214 (+) True G59515
TU80153 lncRNA downstream 32844 7009646 ~ 7050772 (+) False zgc:65851
TU80156 lncRNA downstream 50496 7027298 ~ 7029309 (+) True G59687
TU80157 lncRNA downstream 50496 7027298 ~ 7029309 (+) False G59687
TU80169 lncRNA downstream 105212 7082014 ~ 7106854 (+) False G59694
TU80168 lncRNA downstream 119975 7096777 ~ 7106854 (+) True G59694
XM_039803118.1 mRNA upstream 1037 6952031 ~ 6968096 (+) False figla
XM_039803116.1 mRNA upstream 3574 6951936 ~ 6965559 (+) False figla
XM_039803115.1 mRNA upstream 3574 6952031 ~ 6965559 (+) True figla
XM_039803117.1 mRNA upstream 3576 6952031 ~ 6965557 (+) False figla
XM_039802186.1 mRNA upstream 114729 6829697 ~ 6854404 (+) True npffr1l2
XM_039803119.1 mRNA downstream 20351 6997153 ~ 7007259 (+) True snrnp27
XM_039803211.1 mRNA downstream 31362 7008164 ~ 7026887 (+) True mxd1
XM_039804240.1 mRNA downstream 66395 7043197 ~ 7050770 (+) True zgc:65851
XM_039803500.1 mRNA downstream 98524 7075326 ~ 7101894 (+) True cds2
XM_039804327.1 mRNA downstream 132011 7108813 ~ 7136851 (+) False arhgap25
TU79987 other upstream 291649 6674917 ~ 6677484 (+) False kat6a
TU79733 other upstream 1471379 5495155 ~ 5497754 (+) True G59347
TU79728 other upstream 1515639 5448136 ~ 5453494 (+) False golga3
TU79729 other upstream 1515639 5448136 ~ 5453494 (+) False golga3
TU79671 other upstream 1618002 5053266 ~ 5351131 (+) False fbrsl1
XR_005639484.1 other downstream 623291 7600093 ~ 7623699 (+) False susd1
TU80342 other downstream 649005 7625807 ~ 7629074 (+) False zbtb26
XR_005639603.1 other downstream 707843 7684645 ~ 7684763 (+) True LOC120561481
XR_005639604.1 other downstream 713872 7690674 ~ 7690792 (+) True LOC120561492
XR_005639610.1 other downstream 716289 7693091 ~ 7693209 (+) True LOC120561498

Expression Profile