RNA id: XM_039803054.1


Basic Information

Item Value
RNA id XM_039803054.1
length 2586
RNA type mRNA
GC content 0.50
exon number 11
gene id anapc7
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7877399 ~ 7887425 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGCGCCATATTTAATACATCAAAAGCTAGCTAGAATTGACGTGTTTACAAGCCCTAACTTTTAACTTGAGACGGAAAACTAAAGCAAGCCCTCAACTTAATCAAAAATGAATGTTATAGATCATGTACGGGATATGGCTGCCGCTGGCCTTCACTCTAATGTTCGGATAATGAGCAGTTTGTTGCTGACGATGAGTAATAACAACCCTGAGCTGCTCTCGCCGACCCAGAAGTACCAGTTGTTGGTTTACCACGCTGATTCCATCTTCCATGATAAGGAGTATCGTAATGCCGCCTGTAAATACAGTATGGCATTGCAACAGAAGAAGGTGCTCAGCAAAACGTCTAAAGTCCGTACTTCTACTGGTGGCGCTGCATCTAACATACAGGCACAGAGTTTGCCCTCCGAAATTGAGGTAAAGTACAAGATTGCTGAATGCTACACCATTTTGAAACTGGATAAAGATGCCATTGCAGTGCTGGATGGGATCCCGTCCAGACAGAGGACTCCAAAGATCAATATGATGCTAGCTAACCTGTACAGGAAAGCTGGTCAGGAGCGCTCTGCAGTGACGAGCTACAAAGAGGTCCTCCGACATTGTCCCCTCGCCCTGGATGCAATCATTGGTCTTCTCTCTTTATCAGTCAAAGGAGCTGAAGTGGCATCCATGACAATGGATGTGATCCAGAGCATCCCCAACCTGGACTGGCTCTCCGTTTGGATCAAAGCGTATGCCTTCATACACGCCGGGGACAATCAAAGAGCCATCAACACCATTTGCTCTCTTGAAAAGAAGTCTCTGTTGCGGGACAACGTGGACCTCCTGGTGAGCCTGGCGGATGTCTACTTTAGGGCAGGTGACACCAAGAACGCCATCCTGAAATTTGAACAAGCCCAGATGCTGGACCCGTACCTCATCAAAGGGATGGATGTTTACGGCTACCTGATGGCCCGCGAAGGACACCTGGAGGACGTTGAAGTCCTCGGGGGGCGATTGTTTAACATCTCAGACCAGCATGCAGAACCCTGGGTCATCTCGGGTTGTCACAGCTTTTATAGCAAGCGTTACTCCAGAGCCCTGTACCTGGGAGCGAAGGCCATCCAGCTGAACAGCAACAGTGTCCAGGCTCTCCTCCTGAAGGGGGCAGCCCTGCGGAACATGGGTCGTGTTCAAGAAGCCATCATCCATTTCAGGGAGGCCATGCGCTTGGCTCCCTGCAGGCTCGACTGCTATGAAGGTCTGATTGACTGTTACCTGGCGTCCAATGGGATTCGAGAGGCTATGGGGATGGCCAATAACATCTATAAGACTCTGGGGGCCAATGCACAAACTCTGACCATCCTTGCCACGGTGTGCCTGGAGGACCCGGTGACTCAGGAGAAAGCCAAAACCCTGCTGGACAAAGCTCTGGCCCAGAGACCCGACTACACCAAGGCTGTGGTCAAGAAGGCCGAACTGCTCAgtcGGGAACAGAAACACGAAGAAGGGATCGCTCTCCTCCGGAACGCCCTGGCCAATCAGAGTGATTGTGTCCTGCACAGAATGCTGGGAGATTTCCTGGTGGCTGTCAACGATTACCAAAAAGATGAGAATTttgtgccccccccccctcctaacTGTCAGTTtgtgcatttacattttttttcttttcccagcCTGGATCCCAATGACCAGAAGTCTTTAGAAGGCATGCAGAAgatggagaaggaggagagccCCACAGACGCCACGGTGGAGCTGGACGGTGACGACATGGAGGGCAGCGGGGAGGACGGCGATCTGGAGGGCAGCGACAGCGAAGCGGCACAGTGGGCCGATCAGGAACAGTGGTTTGGTATGCagtgacccccccccctccctcccccccggCCACTGAAGGATACACAGCCACTTCTAACACACGGCAGCCCGCGGGGAGGCTCTCAGCCATCGGTGTCGTCAAACAGGACAAGGTGGCCTCTGATGCTATCTCTCCCCTTCACTGTGGAGTCTCTATACAGCTGTCCAATACACTCTTTAACAGGACCAGCAGACACTCAACCACAAAGAGAATCAACACCTCCATTGCtcaatatttgtgaaaatgacatCATATCTCTGACTCAACTTtggcttttttatattttcatcttTGCTGGCTGCCTGAATATATGCACCACTGTACCCGGTAGCGCAAAGTACAACTTTAAGGTAAATATATTCATCACAAAGTGAGTGTCAgtgtgttaaaataaaataagaccgGCTTTGGATCTTTTTTGGGGGAGGTTGAGTTGTTCAGTATACTGGTGTGCTGTTCCCAGGCAAAAATATGTACCGGGAAACGTAGACCACAGCAATTGTCCGAAACAAATCGTGCGATTTGGAGATTTTGTTGAGGCCATAAGTGTCCGGAGTTGTCCTTCACATGTAACAGGAGGGACTGTGGTTTTGTTTGCTGCAGAGAAGGCAAGTTGTAGATCACAACGAAGGTTGTGAATTTGCCAAAACCTTTTGTCTCCGACAGGCAAACGGGGGTCTGTTGAAAAAGTGACTATGTACCACATTTCCGCTGCTCTTTAAAAATATATCCTCTTAATTTGGAA

Function

GO: NA

KEGG:

id description
K03354 APC7, ANAPC7; anaphase-promoting complex subunit 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU80515 lncRNA downstream 194 7827141 ~ 7877205 (-) True G59951
TU80467 lncRNA downstream 137823 7727777 ~ 7739576 (-) False specc1la
TU80413 lncRNA downstream 260264 7610429 ~ 7617135 (-) False G59875
TU80414 lncRNA downstream 262505 7610429 ~ 7614894 (-) True G59875
TU80418 lncRNA downstream 300824 7576229 ~ 7576575 (-) True G59878
TU80534 lncRNA upstream 14806 7902231 ~ 7902539 (-) True G59970
TU80536 lncRNA upstream 16268 7903693 ~ 7903912 (-) True G59972
TU80643 lncRNA upstream 282960 8170385 ~ 8170606 (-) True G60064
TU80651 lncRNA upstream 313611 8201036 ~ 8201375 (-) True G60072
TU80652 lncRNA upstream 314068 8201493 ~ 8201743 (-) True G60073
XM_039803849.1 mRNA downstream 56927 7766806 ~ 7820472 (-) True si:dkey-91m11.5
XM_039803851.1 mRNA downstream 100573 7766806 ~ 7776826 (-) False si:dkey-91m11.5
XM_039803848.1 mRNA downstream 111387 7727560 ~ 7766012 (-) False specc1la
XM_039803847.1 mRNA downstream 118111 7727560 ~ 7759288 (-) False specc1la
XM_039803846.1 mRNA downstream 118112 7727560 ~ 7759287 (-) False specc1la
XM_039803273.1 mRNA upstream 27432 7914857 ~ 7924566 (-) True pptc7a
XM_039803272.1 mRNA upstream 37508 7924933 ~ 7930884 (-) True ppp1cc
XM_039802093.1 mRNA upstream 45546 7932971 ~ 7939104 (-) False myl2b
XM_039802092.1 mRNA upstream 45546 7932971 ~ 7939069 (-) True myl2b
XM_039803960.1 mRNA upstream 201611 8089036 ~ 8161257 (-) False LOC120561008
TU80421 other downstream 292880 7584086 ~ 7584519 (-) True G59881
unassigned_transcript_243 other downstream 366108 7511221 ~ 7511291 (-) True trnag-ccc
TU80230 other downstream 880543 6991203 ~ 6996856 (-) True G59739
TU80011 other downstream 1353725 6522759 ~ 6523674 (-) True G59563
TU79961 other downstream 1450588 6426250 ~ 6426811 (-) False G59521
TU80745 other upstream 513597 8401022 ~ 8402566 (-) True G60145
TU81433 other upstream 3301717 11189142 ~ 11189741 (-) True G60715
TU82089 other upstream 5701614 13589039 ~ 13589332 (-) True G61264
unassigned_transcript_252 other upstream 7051550 14938975 ~ 14939047 (-) True trnaa-agc_14
unassigned_transcript_253 other upstream 7057071 14944496 ~ 14944568 (-) True trnaa-agc_15

Expression Profile