RNA id: TCONS_00074403


Basic Information

Item Value
RNA id TCONS_00074403
length 415
RNA type processed_transcript
GC content 0.47
exon number 4
gene id XLOC_037898
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 30104920 ~ 30107960 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCAGAGAGCGTTGTCATGGAAACGGAGCAACGACACGACACCTGACCGTCAACAGCACTTCTCTCATGCGGCAGTTTTCACtaatttcagAAGTGACAAAATTACCCCTACAACAGAAGAGAAGAGCCAAGATGAAGGGAGCTAATCACTGAGCTGGAGGAAACACAGATTTTGGATCGTCCTCCACTCACTCTACCACTTTGTTTTTCCTTGCCAGACTTCATTCAAGAAGCCTGCTACAAGAGAAACAGCGGAAGGGAGCCTCCAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAACctgcattttccttcagcttaatatcaggggtcgccacagcgtaaggAACTGGATAttactttggcatatgttttacacagcggatggccttccagctgc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000135793

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074395 lncRNA downstream 398813 29682197 ~ 29707257 (-) True XLOC_037894
TCONS_00075380 lncRNA downstream 419912 29682197 ~ 29686158 (-) False XLOC_037894
TCONS_00074391 lncRNA downstream 443445 29652041 ~ 29662625 (-) False XLOC_037893
TCONS_00075379 lncRNA downstream 444074 29652041 ~ 29661996 (-) False XLOC_037893
TCONS_00074392 lncRNA downstream 444160 29652041 ~ 29661910 (-) False XLOC_037893
TCONS_00074408 lncRNA upstream 81369 30189302 ~ 30190457 (-) True XLOC_037900
TCONS_00074412 lncRNA upstream 137704 30245637 ~ 30248034 (-) False XLOC_037901
TCONS_00074413 lncRNA upstream 137707 30245640 ~ 30248023 (-) True XLOC_037901
TCONS_00074415 lncRNA upstream 141152 30249085 ~ 30255337 (-) False XLOC_037902
TCONS_00074422 lncRNA upstream 163092 30271025 ~ 30271850 (-) True XLOC_037904
TCONS_00074399 mRNA downstream 51892 30013667 ~ 30054178 (-) False XLOC_037897
TCONS_00074396 mRNA downstream 120680 29716380 ~ 29985390 (-) False XLOC_037895
TCONS_00074397 mRNA downstream 261474 29718479 ~ 29844596 (-) True XLOC_037895
TCONS_00074390 mRNA downstream 462442 29636620 ~ 29643628 (-) True XLOC_037892
TCONS_00074389 mRNA downstream 526162 29571811 ~ 29579908 (-) True XLOC_037891
TCONS_00074404 mRNA upstream 24565 30132498 ~ 30145080 (-) False XLOC_037899
TCONS_00074405 mRNA upstream 24565 30132498 ~ 30165621 (-) False XLOC_037899
TCONS_00074406 mRNA upstream 50664 30158597 ~ 30160897 (-) True XLOC_037899
TCONS_00074407 mRNA upstream 80831 30188764 ~ 30190513 (-) False XLOC_037900
TCONS_00074409 mRNA upstream 109895 30217828 ~ 30243393 (-) False XLOC_037901
TCONS_00074400 other downstream 51892 30027905 ~ 30054178 (-) True XLOC_037897
TCONS_00074398 other downstream 298006 29807947 ~ 29808064 (-) True XLOC_037896
TCONS_00074394 other downstream 453458 29652511 ~ 29652612 (-) True XLOC_037893
TCONS_00074393 other downstream 453607 29652354 ~ 29652463 (-) False XLOC_037893
TCONS_00074385 other downstream 608157 29496010 ~ 29497913 (-) True XLOC_037888
TCONS_00074423 other upstream 188742 30296675 ~ 30296791 (-) True XLOC_037905
TCONS_00074436 other upstream 569537 30677470 ~ 30680018 (-) True XLOC_037915
TCONS_00074437 other upstream 599906 30707839 ~ 30707954 (-) True XLOC_037916
TCONS_00074442 other upstream 1079805 31187738 ~ 31187859 (-) True XLOC_037923
TCONS_00074446 other upstream 1166175 31274108 ~ 31314324 (-) True XLOC_037925

Expression Profile

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