RNA id: TCONS_00074406


Basic Information

Item Value
RNA id TCONS_00074406
length 382
RNA type mRNA
GC content 0.50
exon number 3
gene id XLOC_037899
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 30132498 ~ 30165621 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCAACACAAAACATGAGGGTCCGGATCAGCGCTGTTGGAGACACCGTCGTCTTCAAGTTCATCAGGCCTCATGTGGACTCCAGACTGGGAGGGTATATCCTGGGCTATGGCAGCAGCATGTTCTCCAAACAATTCATCCAGCTGCCGGAGGATGGACAACCTTATGAGACTGAGATAGATGCTGAACCCAAATATCTGCTCGCGATACAATCAAATAAACCAGAAGAACCTAAGAAACAGTGTGCAGGGAAAGTGGACCTAGAGGTGCCCTTAAATGTGGTGATCGGTTCAGTAACAGAGTCGTCTGTGCTGCTGTCCTGGGGGACACTGTTGACCAGCCCCTTCACAGACTCCATTGTGGATGACTGTTTTGATGAGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143986

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074395 lncRNA downstream 451340 29682197 ~ 29707257 (-) True XLOC_037894
TCONS_00075380 lncRNA downstream 472439 29682197 ~ 29686158 (-) False XLOC_037894
TCONS_00074391 lncRNA downstream 495972 29652041 ~ 29662625 (-) False XLOC_037893
TCONS_00075379 lncRNA downstream 496601 29652041 ~ 29661996 (-) False XLOC_037893
TCONS_00074392 lncRNA downstream 496687 29652041 ~ 29661910 (-) False XLOC_037893
TCONS_00074408 lncRNA upstream 28405 30189302 ~ 30190457 (-) True XLOC_037900
TCONS_00074412 lncRNA upstream 84740 30245637 ~ 30248034 (-) False XLOC_037901
TCONS_00074413 lncRNA upstream 84743 30245640 ~ 30248023 (-) True XLOC_037901
TCONS_00074415 lncRNA upstream 88188 30249085 ~ 30255337 (-) False XLOC_037902
TCONS_00074422 lncRNA upstream 110128 30271025 ~ 30271850 (-) True XLOC_037904
TCONS_00074404 mRNA downstream 13517 30132498 ~ 30145080 (-) False XLOC_037899
TCONS_00074399 mRNA downstream 104419 30013667 ~ 30054178 (-) False XLOC_037897
TCONS_00074396 mRNA downstream 173207 29716380 ~ 29985390 (-) False XLOC_037895
TCONS_00074397 mRNA downstream 314001 29718479 ~ 29844596 (-) True XLOC_037895
TCONS_00074390 mRNA downstream 514969 29636620 ~ 29643628 (-) True XLOC_037892
TCONS_00074407 mRNA upstream 27867 30188764 ~ 30190513 (-) False XLOC_037900
TCONS_00074409 mRNA upstream 56931 30217828 ~ 30243393 (-) False XLOC_037901
TCONS_00074410 mRNA upstream 56933 30217830 ~ 30220818 (-) False XLOC_037901
TCONS_00074411 mRNA upstream 75294 30236191 ~ 30247961 (-) False XLOC_037901
TCONS_00074414 mRNA upstream 87674 30248571 ~ 30259512 (-) False XLOC_037902
TCONS_00074401 other downstream 50637 30104920 ~ 30107960 (-) False XLOC_037898
TCONS_00074403 other downstream 50664 30106070 ~ 30107933 (-) True XLOC_037898
TCONS_00074402 other downstream 50683 30105442 ~ 30107914 (-) False XLOC_037898
TCONS_00074400 other downstream 104419 30027905 ~ 30054178 (-) True XLOC_037897
TCONS_00074398 other downstream 350533 29807947 ~ 29808064 (-) True XLOC_037896
TCONS_00074423 other upstream 135778 30296675 ~ 30296791 (-) True XLOC_037905
TCONS_00074436 other upstream 516573 30677470 ~ 30680018 (-) True XLOC_037915
TCONS_00074437 other upstream 546942 30707839 ~ 30707954 (-) True XLOC_037916
TCONS_00074442 other upstream 1026841 31187738 ~ 31187859 (-) True XLOC_037923
TCONS_00074446 other upstream 1113211 31274108 ~ 31314324 (-) True XLOC_037925

Expression Profile

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