RNA id: TU82133



Basic Information


Item Value
RNA id TU82133
length 255
lncRNA type intronic
GC content 0.46
exon number 2
gene id G61304
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13856241 ~ 13856771 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gggtttaggaaaagaagaacgggacggttgggtttaggaaaagaagaacgggactgttgggtttaggtaaagaagaacgggacagttgggtttaggaaaagaagaacgggacggttgggtttaggaaaagaagaacgggactgttgggtttaggtaaagaagaacgggacagttgggtttaggaaaaggagaacgggacagttgggtttaggtaaagaagaacgggacggttgggtttaggaaaagaagaacagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU82131 lncRNA downstream 36513 13819510 ~ 13819728 (-) True G61302
TU82130 lncRNA downstream 38718 13816900 ~ 13817523 (-) True G61301
TU82099 lncRNA downstream 176788 13679239 ~ 13679453 (-) True G61274
TU82098 lncRNA downstream 186172 13669821 ~ 13670069 (-) True G61273
TU82096 lncRNA downstream 208920 13645392 ~ 13647321 (-) True G61271
TU82162 lncRNA upstream 156565 14013336 ~ 14013562 (-) True G61328
TU82168 lncRNA upstream 224556 14081327 ~ 14081555 (-) True G61334
TU82169 lncRNA upstream 233704 14090475 ~ 14090750 (-) True G61335
TU82193 lncRNA upstream 320552 14177323 ~ 14178170 (-) True G61359
TU82249 lncRNA upstream 362576 14219347 ~ 14233438 (-) True G61404
XM_039804379.1 mRNA downstream 80022 13740353 ~ 13776219 (-) False nr6a1a
XM_039804380.1 mRNA downstream 82863 13740353 ~ 13773378 (-) False nr6a1a
XM_039804377.1 mRNA downstream 169335 13649892 ~ 13686906 (-) False LOC120561314
XM_039804376.1 mRNA downstream 169335 13649892 ~ 13686906 (-) True LOC120561314
XM_039804294.1 mRNA downstream 761745 13084483 ~ 13094496 (-) True LOC120561257
XM_039802083.1 mRNA upstream 106372 13963143 ~ 13972136 (-) True LOC120559998
XM_039802118.1 mRNA upstream 250632 14107403 ~ 14142258 (-) True htr7c
XM_039803876.1 mRNA upstream 389712 14246483 ~ 14248811 (-) True LOC120560956
XM_039802862.1 mRNA upstream 398926 14255697 ~ 14260239 (-) True LOC120560399
XM_039803905.1 mRNA upstream 432231 14289002 ~ 14312345 (-) False LOC120560975
TU82089 other downstream 266909 13589039 ~ 13589332 (-) True G61264
TU81433 other downstream 2666500 11189142 ~ 11189741 (-) True G60715
TU80745 other downstream 5453675 8401022 ~ 8402566 (-) True G60145
TU80531 other downstream 5968838 7879424 ~ 7887403 (-) False anapc7
TU80421 other downstream 6271722 7584086 ~ 7584519 (-) True G59881
unassigned_transcript_252 other upstream 1082204 14938975 ~ 14939047 (-) True trnaa-agc_14
unassigned_transcript_253 other upstream 1087725 14944496 ~ 14944568 (-) True trnaa-agc_15
unassigned_transcript_254 other upstream 1091988 14948759 ~ 14948830 (-) True trnae-cuc_15
unassigned_transcript_255 other upstream 1094731 14951502 ~ 14951583 (-) True trnas-gcu
unassigned_transcript_256 other upstream 1110908 14967679 ~ 14967760 (-) True trnas-gcu_1

Expression Profile