RNA id: TU82399



Basic Information


Item Value
RNA id TU82399
length 853
RNA type TUCP
GC content 0.58
exon number 6
gene id G61514
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14699525 ~ 14794602 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tcatcatcatcatcactgccGTACCGCGGGACTCGTCTCACCGGACTTTAACCTGAGCTGGGAGCCGTTTCTCCGCACTTAAGTGCCTTAACAGCGGAGGGAGAGATGGGACACGGAGACCTGATGAGCCAGGCGGAGGATGTAGCGGACCAGtTCCTGCGGGTCACCAAACACTACCTCCCCCACATGGCCCGGCTCTGTCTGGTCAGCACCTTCCTGGAGGACGGGTTCAGGATGTGGTTCCAGTGGGGGGAGCAGAGTGAGTACATCGAATCCACCTGGAACTGTGGACACTTCCTCGCCAACATCTTCGTCCTGCTCAACTTGCTGGGGCAGCTGGgtggCTGTGTGTTAATCCTCAGTAGAAACTTTGTTCAGTACGCCTGCTTCACTCTGTTTGGGATCATTGGcctgcagACGCTGGCCTACAGCATCCTGTGGGACCCAAAGTTTCTCATGAGGAACCTGGCGTTGGGGGgaggcctcctcctcctcctggcaGAGTGTCGGGGGGAGGCTCGCAGTGTGTTTGCAGGAGTTCCTTCTCTCGGTCATCAGAGCTCCCCGAAACACCTCCTGCAGCTGGGAGGAAGGGTCCTCCTTGTCCTCATGTTCATGACGCTGCTGCACTTTGACCTCAGTCTGTTCAGtATCCTGCAGAACCTGGTGGGTACGGCACTCATCGTGCTGGTGGCGGTGGGCTTTAAGACCAAGTTGGCCGCTCTGACTCTGGTGGTCTGGCTGCTCTGCATCAACTTCACCTTCAACGCCTTCTGGAGCATCCCGTCGTACAAACCCATGCACGACTTCCTCAAGTACGACTTCTTCCAGACCACGTCGGTGATCGGAGGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639594.1 lncRNA upstream 23516 14755450 ~ 14762495 (+) True LOC120561401
TU82398 lncRNA upstream 31955 14699525 ~ 14754056 (+) True G61514
TU82392 lncRNA upstream 108639 14676137 ~ 14677372 (+) True G61513
TU82340 lncRNA upstream 286577 14499180 ~ 14499434 (+) True G61468
XR_005639540.1 lncRNA upstream 286954 14497838 ~ 14499057 (+) False LOC120560938
TU82458 lncRNA downstream 231839 15026441 ~ 15027400 (+) True G61539
TU82459 lncRNA downstream 233003 15027605 ~ 15027818 (+) True G61540
TU82698 lncRNA downstream 351498 15146100 ~ 15152551 (+) True G61730
TU82731 lncRNA downstream 428520 15223122 ~ 15224015 (+) False nudt18
TU82732 lncRNA downstream 429512 15224114 ~ 15224465 (+) True G61756
XM_039804510.1 mRNA upstream 13859 14767716 ~ 14772152 (+) True kazald3
XM_039802857.1 mRNA upstream 32611 14677671 ~ 14753400 (+) True grin1b
XM_039802194.1 mRNA downstream 47469 14842071 ~ 14867655 (+) True LOC120560087
XM_039802198.1 mRNA downstream 47469 14842071 ~ 14867655 (+) False LOC120560087
XM_039802196.1 mRNA downstream 47469 14842071 ~ 14867655 (+) False LOC120560087
XM_039802195.1 mRNA downstream 47469 14842071 ~ 14867655 (+) False LOC120560087
XM_039802197.1 mRNA downstream 47469 14842071 ~ 14867655 (+) False LOC120560087
TU82405 other upstream 23462 14755525 ~ 14762549 (+) False LOC120561401
TU82404 other upstream 23522 14755525 ~ 14762489 (+) False LOC120561401
TU82322 other upstream 351414 14431330 ~ 14434597 (+) True LOC120560925
TU82315 other upstream 393433 14389603 ~ 14392578 (+) True c6h12orf43
TU82227 other upstream 466505 14317539 ~ 14319506 (+) False G61390
TU82426 other downstream 144791 14939393 ~ 14950621 (+) False cntrl
TU82454 other downstream 284272 15078874 ~ 15083448 (+) True G61535
XR_005639607.1 other downstream 503940 15298542 ~ 15298643 (+) True LOC120561495
XR_005639522.1 other downstream 637106 15431708 ~ 15434443 (+) False zgc:101664
unassigned_transcript_259 other downstream 823283 15617885 ~ 15617956 (+) True trnac-gca_19

Expression Profile