RNA id: TU83121



Basic Information


Item Value
RNA id TU83121
length 392
RNA type TUCP
GC content 0.48
exon number 3
gene id LOC120561322
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16548617 ~ 16551175 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCCTCGGTTGCTGAGCAACCGTAGACTACACGGATAAGGctttatatatatctatgtatatGTCAATGGGATAAGGGTGTAACGTTACAAAGGAATGTGTATGCCTCTAAGCCAAGATGCCCCGCTCTGCAGCCAAGTCCCAAGCTGAGAAGCAAAGACCCAAGTCGTCTGTCCCAGTGAACACACCTCCAACGCCAGACCTGAAAGTGGAAGATATAATCCCTGGTCGCTTAACACAGGCCCAATGGACAGACATGTTGATCCGGGAGGATGCAGATGAGGCTGTGGCGGTGATCATAGAGGACGTGTTGAGCAAGGTCATGGAACGCTGTCTTagattaaaaattaaaagacaGTACCTTTCTCTGCATCCTGGGCCAAGAGATACCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639591.1 lncRNA downstream 40371 16507046 ~ 16508251 (-) True LOC120561369
TU83105 lncRNA downstream 42500 16505270 ~ 16506122 (-) True G62065
TU83054 lncRNA downstream 392933 16153049 ~ 16155689 (-) False LOC120560105
TU83037 lncRNA downstream 406941 16117227 ~ 16141681 (-) True G62001
TU83032 lncRNA downstream 448239 16096421 ~ 16100383 (-) True G61998
XR_005639577.1 lncRNA upstream 13214 16563470 ~ 16564460 (-) True LOC120561239
TU83153 lncRNA upstream 59317 16609573 ~ 16663861 (-) False G62103
TU83155 lncRNA upstream 60221 16610477 ~ 16620203 (-) True G62104
TU83152 lncRNA upstream 112035 16662291 ~ 16663861 (-) True G62103
TU83170 lncRNA upstream 125436 16675692 ~ 16686359 (-) True G62114
XM_039804382.1 mRNA downstream 55 16547281 ~ 16548567 (-) True LOC120561320
XM_039803786.1 mRNA downstream 2150 16531652 ~ 16546472 (-) True nol6
XM_039804539.1 mRNA downstream 29306 16512377 ~ 16519316 (-) True aqp3a
XM_039802276.1 mRNA downstream 96134 16152420 ~ 16452488 (-) True LOC120560105
XM_039802850.1 mRNA downstream 415678 16124488 ~ 16132944 (-) True nr2f1a
XM_039802920.1 mRNA upstream 472282 17022538 ~ 17055682 (-) True LOC120560423
XM_039802921.1 mRNA upstream 472282 17022538 ~ 17049645 (-) False LOC120560423
XM_039802923.1 mRNA upstream 533311 17083567 ~ 17085812 (-) False LOC120560425
XM_039803149.1 mRNA upstream 932384 17482640 ~ 17535168 (-) True LOC120560528
XM_039803288.1 mRNA upstream 984227 17534483 ~ 17568014 (-) False LOC120560614
TU83104 other downstream 43555 16504626 ~ 16505067 (-) True G62064
XR_005639521.1 other downstream 1146298 15369827 ~ 15402324 (-) False LOC120560838
XR_005639520.1 other downstream 1146298 15369827 ~ 15402324 (-) False LOC120560838
TU82789 other downstream 1315933 15225095 ~ 15232689 (-) False LOC120560831
TU82785 other downstream 1330213 15216550 ~ 15218409 (-) False sdhaf1
TU83278 other upstream 573740 17123996 ~ 17124477 (-) True G62194
TU83293 other upstream 928050 17478306 ~ 17480814 (-) True G62209
XR_005639495.1 other upstream 991140 17541396 ~ 17568014 (-) False LOC120560614
XR_005639575.1 other upstream 1047832 17598088 ~ 17605120 (-) False LOC120561236
XR_005639576.1 other upstream 1047832 17598088 ~ 17605120 (-) False LOC120561236

Expression Profile