RNA id: TU83278


Basic Information

Item Value
RNA id TU83278
length 482
RNA type TUCP
GC content 0.44
exon number 1
gene id G62194
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17123996 ~ 17124477 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

taaactttcagctcatacaatgagaagactaatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatactgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccaaaagccacctgggagacacaccaaacatgtggaagaaggtgctgtggtcagatgaaaccaaaatcaaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatcctcactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83269 lncRNA downstream 38175 17083479 ~ 17085821 (-) True LOC120560425
TU83264 lncRNA downstream 57540 17065836 ~ 17066456 (-) True G62183
TU83206 lncRNA downstream 238047 16882821 ~ 16885949 (-) True G62131
XR_005639473.1 lncRNA downstream 288709 16821805 ~ 16835287 (-) True LOC120560320
TU83201 lncRNA downstream 302302 16821072 ~ 16821694 (-) True G62130
TU83289 lncRNA upstream 290175 17414652 ~ 17415346 (-) True G62205
TU83321 lncRNA upstream 451164 17575641 ~ 17575949 (-) True G62230
TU83322 lncRNA upstream 451742 17576219 ~ 17576552 (-) True G62231
TU83447 lncRNA upstream 717242 17841719 ~ 17842452 (-) True G62318
XR_005639419.1 lncRNA upstream 772314 17896791 ~ 17899827 (-) True LOC120560086
XM_039802923.1 mRNA downstream 38184 17083567 ~ 17085812 (-) False LOC120560425
XM_039802920.1 mRNA downstream 68314 17022538 ~ 17055682 (-) True LOC120560423
XM_039802921.1 mRNA downstream 74351 17022538 ~ 17049645 (-) False LOC120560423
XM_039804382.1 mRNA downstream 575429 16547281 ~ 16548567 (-) True LOC120561320
XM_039803786.1 mRNA downstream 577524 16531652 ~ 16546472 (-) True nol6
XM_039803149.1 mRNA upstream 358163 17482640 ~ 17535168 (-) True LOC120560528
XM_039803288.1 mRNA upstream 410006 17534483 ~ 17568014 (-) False LOC120560614
XM_039803290.1 mRNA upstream 416919 17541396 ~ 17568014 (-) False LOC120560614
XM_039803287.1 mRNA upstream 416919 17541396 ~ 17568014 (-) True LOC120560614
XM_039803286.1 mRNA upstream 418605 17543082 ~ 17568014 (-) False LOC120560614
TU83120 other downstream 572821 16548622 ~ 16551175 (-) False LOC120561322
TU83119 other downstream 573740 16548622 ~ 16550256 (-) False LOC120561322
TU83121 other downstream 573740 16548622 ~ 16550256 (-) False LOC120561322
TU83104 other downstream 618929 16504626 ~ 16505067 (-) True G62064
XR_005639521.1 other downstream 1721672 15369827 ~ 15402324 (-) False LOC120560838
TU83293 other upstream 353829 17478306 ~ 17480814 (-) True G62209
XR_005639495.1 other upstream 416919 17541396 ~ 17568014 (-) False LOC120560614
XR_005639575.1 other upstream 473611 17598088 ~ 17605120 (-) False LOC120561236
XR_005639576.1 other upstream 473611 17598088 ~ 17605120 (-) False LOC120561236
XR_005639574.1 other upstream 473611 17598088 ~ 17605120 (-) True LOC120561236

Expression Profile