RNA id: TU83952



Basic Information


Item Value
RNA id TU83952
length 639
lncRNA type sense_over
GC content 0.48
exon number 3
gene id mvk
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18737518 ~ 18742399 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGTTTGTAACATGTTTGTAAAATGCTTCGTTGAGGATCCTCTGTTGCTCTGATGCTTTGTTAAGCTCTCTTTTATTGTCGAGTCTTCATGAAAAACGTAGAGCTGTGAGACAGATTTGTCAATTGCTGGTTAGTGCTTCAGAGGATTAACATTAGCTAAAGGTGGCAAAGCAAGCTAATAATAACTGTCAGTCACAAGTTGAACTTAAAGCTGCCCAGTTGTGGACAGATCTTTACACTCTGGGAACTGTTACCGAAATGCAACTCAAGGACGTATTCGTGTCTGCTCCAGGGAAGGCGATCCTCCACGGAGAGCATGCGGTTGTGCACGGAAAGGTAAGAGGGAAGAGACGAAACGTCTGGATGCGGAACTTATAAGAAGACTGCGTGAATTTATTGGTGTCACCAATGGAAACTTGGACACTTGCAACATGGCCATCCTAGCCTTCCTCTACATCTACCTCTCACTGTTTGGATCAGGTGAGCTGCCCAGCTTGTCGGTGACTGTGTGGTCGGAGCTGCCGACTGGAACAGGACTGGGGTCAAGTGCTGCCTACTCCGTGTGtttagctgctgctctgctctgtGCAAGTGGAACTATCCCCACTCCTCTCAAAGAGGGGGATAACACTGCCAGGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83911 lncRNA upstream 100333 18636726 ~ 18637221 (+) True G62667
TU83895 lncRNA upstream 119985 18617074 ~ 18617569 (+) True G62656
TU83839 lncRNA upstream 206243 18531010 ~ 18531311 (+) True G62613
TU83773 lncRNA upstream 235179 18501762 ~ 18502375 (+) True G62560
TU83772 lncRNA upstream 237048 18500125 ~ 18500506 (+) True G62559
TU83993 lncRNA downstream 5092 18747490 ~ 18748496 (+) True G62732
TU83994 lncRNA downstream 5092 18747490 ~ 18748152 (+) False G62732
TU84005 lncRNA downstream 30357 18772755 ~ 18773108 (+) True G62741
TU84019 lncRNA downstream 122177 18864575 ~ 18864807 (+) True G62755
TU84099 lncRNA downstream 223685 18966083 ~ 18982623 (+) True G62796
XM_039802310.1 mRNA upstream 1079 18730216 ~ 18736475 (+) True aldh3b2
XM_039802311.1 mRNA upstream 1079 18731901 ~ 18736475 (+) False aldh3b2
XM_039802309.1 mRNA upstream 1079 18731902 ~ 18736475 (+) False aldh3b2
XM_039802312.1 mRNA upstream 1079 18732155 ~ 18736475 (+) False aldh3b2
XM_039802306.1 mRNA upstream 7614 18720734 ~ 18729940 (+) True ube3b
XM_039803256.1 mRNA downstream 51852 18794250 ~ 18841202 (+) True fam222a
XM_039802370.1 mRNA downstream 129884 18872282 ~ 18878090 (+) True LOC120560157
XM_039802369.1 mRNA downstream 154225 18896623 ~ 18904773 (+) True ankrd13a
XM_039803869.1 mRNA downstream 181917 18924315 ~ 18952142 (+) True sgsm1a
XM_039803870.1 mRNA downstream 181917 18924315 ~ 18952142 (+) False sgsm1a
XR_005639481.1 other upstream 56393 18661157 ~ 18681161 (+) False acacb
TU83744 other upstream 317964 18416128 ~ 18419590 (+) False tbx5b
TU83742 other upstream 321548 18407387 ~ 18416006 (+) False tbx5b
TU83701 other upstream 406324 18330705 ~ 18331230 (+) True G62513
XR_005639579.1 other upstream 728236 17998686 ~ 18009318 (+) False cmya5
TU84360 other downstream 692509 19434907 ~ 19448950 (+) False rasl10a
XR_005639482.1 other downstream 1735414 20477812 ~ 20488838 (+) False wdr31
XR_005639483.1 other downstream 1735414 20477812 ~ 20488838 (+) False wdr31
TU85087 other downstream 1934019 20676417 ~ 20677916 (+) True G63480
XR_005639510.1 other downstream 2846478 21588876 ~ 21598799 (+) False LOC120560787

Expression Profile