RNA id: TU86515


Basic Information

Item Value
RNA id TU86515
length 332
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G64607
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25788457 ~ 25795441 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATTATGCTTATGCTTTGAGAATGAACGAGCAGAGTTAAACCAGGAATAGACTGGTGAGGACTTCTCGGTGCACAAGACTCACAGAATGACTGCAGACAGGATTCCCAGCAGAGGTGATGTTCACTTCCTGAATGGAGAGATGGGGGAGGGGATCTTGATGTCCTGCCCCCTCTCCAGTCTCTTCTCACATTCAATCAGGTAATTTACACCGTCAATCACTAATTGTACCAGCTCGACCTGTGGATGCATAGTAACTAGTGTCAAAGATCAATATGTATATAGTTGTTACATTTGAATTAATATCCATGCAATTCTATCTACTATGGTCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639536.1 lncRNA upstream 40568 25713910 ~ 25747889 (+) True LOC120560927
TU86493 lncRNA upstream 88673 25697063 ~ 25699784 (+) True G64592
TU86472 lncRNA upstream 125072 25663027 ~ 25663385 (+) True G64578
TU86363 lncRNA upstream 232676 25552939 ~ 25555781 (+) True G64495
XR_005639499.1 lncRNA upstream 236193 25548023 ~ 25552264 (+) True LOC120560635
XR_005639405.1 lncRNA downstream 43695 25839136 ~ 25843093 (+) True LOC120560032
TU86551 lncRNA downstream 120503 25915944 ~ 25916892 (+) True G64643
TU86566 lncRNA downstream 121746 25917187 ~ 25917476 (+) True G64657
TU86567 lncRNA downstream 122324 25917765 ~ 25918093 (+) True G64658
TU86572 lncRNA downstream 126722 25922163 ~ 25922388 (+) True G64663
XM_039802030.1 mRNA upstream 4420 25774378 ~ 25784037 (+) True LOC120559963
XM_039802203.1 mRNA upstream 25551 25757088 ~ 25762906 (+) True LOC120560092
XM_039802204.1 mRNA upstream 25551 25757088 ~ 25762906 (+) False LOC120560092
XM_039804178.1 mRNA upstream 91881 25684964 ~ 25696576 (+) True LOC120561182
XM_039803612.1 mRNA upstream 128996 25655685 ~ 25659461 (+) True LOC120560772
XM_039802136.1 mRNA downstream 118838 25914279 ~ 25915577 (+) True LOC120560031
XM_039802758.1 mRNA downstream 130659 25926100 ~ 25928596 (+) True LOC120560359
XM_039802766.1 mRNA downstream 144335 25939776 ~ 25949337 (+) False LOC120560362
XM_039802763.1 mRNA downstream 144423 25939864 ~ 25949337 (+) False LOC120560362
XM_039802770.1 mRNA downstream 144423 25939864 ~ 25949337 (+) False LOC120560362
TU86491 other upstream 91887 25684972 ~ 25696570 (+) False LOC120561182
XR_005639471.1 other upstream 953826 24823718 ~ 24834631 (+) False cdc14b
XR_005639472.1 other upstream 953837 24823719 ~ 24834620 (+) False cdc14b
TU85875 other upstream 2095166 23692662 ~ 23693291 (+) True G64108
TU85622 other upstream 2858252 22929899 ~ 22930205 (+) True G63905
TU86550 other downstream 118941 25914382 ~ 25915529 (+) False LOC120560031
TU86770 other downstream 617428 26412869 ~ 26414597 (+) True G64814
TU86790 other downstream 698894 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other downstream 698894 26494335 ~ 26496328 (+) False c6h22orf39
TU86793 other downstream 698894 26494335 ~ 26496261 (+) False c6h22orf39

Expression Profile