RNA id: TU86567


Basic Information

Item Value
RNA id TU86567
length 329
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G64658
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25917765 ~ 25918093 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cctaatacctgttgatactacaacaatgcaaaatatagactcttaaccttgcagttttgcacatatcatgtaagactctatttctccatttctttgcacaaaactctccagaaagtgccatttaatggtttatttttcaattttttttccgGACCCCCGTAGGGAGAGCCCCCCCACATAACAAattccaatttaacccctgcttgcatgcatgtacaaatcaccagcagcaaatattgtgctagtactagtattgaactacaagcagcaagacagttgcaagcctttaattagagttatgtaaagcttttgatgggacagttaggtcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86566 lncRNA upstream 289 25917187 ~ 25917476 (+) True G64657
TU86551 lncRNA upstream 873 25915944 ~ 25916892 (+) True G64643
XR_005639405.1 lncRNA upstream 74672 25839136 ~ 25843093 (+) True LOC120560032
TU86515 lncRNA upstream 122324 25788457 ~ 25795441 (+) True G64607
XR_005639536.1 lncRNA upstream 169876 25713910 ~ 25747889 (+) True LOC120560927
TU86572 lncRNA downstream 4070 25922163 ~ 25922388 (+) True G64663
TU86549 lncRNA downstream 7994 25926087 ~ 25928592 (+) False LOC120560359
TU86587 lncRNA downstream 10831 25928924 ~ 25929158 (+) True G64677
TU86705 lncRNA downstream 385757 26303850 ~ 26321956 (+) True G64764
TU86725 lncRNA downstream 453541 26371634 ~ 26383843 (+) False nsd3
XM_039802136.1 mRNA upstream 2188 25914279 ~ 25915577 (+) True LOC120560031
XM_039802030.1 mRNA upstream 133728 25774378 ~ 25784037 (+) True LOC120559963
XM_039802203.1 mRNA upstream 154859 25757088 ~ 25762906 (+) True LOC120560092
XM_039802204.1 mRNA upstream 154859 25757088 ~ 25762906 (+) False LOC120560092
XM_039804178.1 mRNA upstream 221189 25684964 ~ 25696576 (+) True LOC120561182
XM_039802758.1 mRNA downstream 8007 25926100 ~ 25928596 (+) True LOC120560359
XM_039802766.1 mRNA downstream 21683 25939776 ~ 25949337 (+) False LOC120560362
XM_039802763.1 mRNA downstream 21771 25939864 ~ 25949337 (+) False LOC120560362
XM_039802770.1 mRNA downstream 21771 25939864 ~ 25949337 (+) False LOC120560362
XM_039802769.1 mRNA downstream 21771 25939864 ~ 25949337 (+) False LOC120560362
TU86550 other upstream 2236 25914382 ~ 25915529 (+) False LOC120560031
TU86491 other upstream 221195 25684972 ~ 25696570 (+) False LOC120561182
XR_005639471.1 other upstream 1083134 24823718 ~ 24834631 (+) False cdc14b
XR_005639472.1 other upstream 1083145 24823719 ~ 24834620 (+) False cdc14b
TU85875 other upstream 2224474 23692662 ~ 23693291 (+) True G64108
TU86770 other downstream 494776 26412869 ~ 26414597 (+) True G64814
TU86790 other downstream 576242 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other downstream 576242 26494335 ~ 26496328 (+) False c6h22orf39
TU86793 other downstream 576242 26494335 ~ 26496261 (+) False c6h22orf39
XR_005639500.1 other downstream 696144 26614237 ~ 26642481 (+) False cltcl1

Expression Profile