RNA id: TU87497


Basic Information

Item Value
RNA id TU87497
length 241
lncRNA type intronic
GC content 0.42
exon number 3
gene id G65362
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 28371456 ~ 28371841 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtcaagtcactcaaattgttcaaactgtaaagatgtgtgttctgagtgacagtgtgtgtgtgtgtgttatctcagtgaggattgttcatagtgtttggctgcactgagcctgttttgagacgtgtgttaagagttgtgttgctttgaatgagttttgcaggtgatgtgaactgtttagctcaggtgactgtaggtagtgcagactgtagtttgagttttgcacatgtgactccagttgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87444 lncRNA upstream 366335 28002539 ~ 28005121 (+) True G65314
TU87374 lncRNA upstream 466523 27903075 ~ 27904933 (+) True G65272
TU87249 lncRNA upstream 894490 27476748 ~ 27476966 (+) True G65171
TU87150 lncRNA upstream 981594 27389457 ~ 27389862 (+) True G65108
TU87147 lncRNA upstream 992241 27378998 ~ 27379215 (+) True G65106
TU87515 lncRNA downstream 90784 28462625 ~ 28463104 (+) True G65378
TU87522 lncRNA downstream 249244 28621085 ~ 28621299 (+) True G65385
TU87531 lncRNA downstream 384024 28755865 ~ 28756193 (+) True G65394
TU87533 lncRNA downstream 394179 28766020 ~ 28766225 (+) True G65396
TU87555 lncRNA downstream 443413 28815254 ~ 28815476 (+) True G65417
XM_039803263.1 mRNA upstream 292553 28034779 ~ 28078903 (+) True aacs
XM_039802373.1 mRNA upstream 370434 27986123 ~ 28001022 (+) False si:dkey-164f24.2
XM_039802371.1 mRNA upstream 370434 27986124 ~ 28001022 (+) True si:dkey-164f24.2
XM_039802372.1 mRNA upstream 370434 27986125 ~ 28001022 (+) False si:dkey-164f24.2
XM_039803843.1 mRNA upstream 405027 27962610 ~ 27966429 (+) False si:dkey-283b1.6
XM_039803241.1 mRNA downstream 403058 28774899 ~ 28800682 (+) True jak2b
XM_039803242.1 mRNA downstream 435512 28807353 ~ 28812996 (+) True zgc:114041
XM_039804022.1 mRNA downstream 475254 28847095 ~ 28849471 (+) False mboat4
XM_039802531.1 mRNA downstream 488670 28860511 ~ 28873349 (+) True LOC120560259
XM_039802532.1 mRNA downstream 501801 28873642 ~ 28879999 (+) True mfsd10
TU87117 other upstream 1069686 27205234 ~ 27301770 (+) True G65084
TU86927 other upstream 1713487 26645020 ~ 26657969 (+) False si:dkey-178e17.1
XR_005639500.1 other upstream 1728975 26614237 ~ 26642481 (+) False cltcl1
TU86791 other upstream 1875128 26494335 ~ 26496328 (+) False c6h22orf39
TU87830 other downstream 978283 29350124 ~ 29351753 (+) False ubac1
XR_005639517.1 other downstream 1815007 30186848 ~ 30212108 (+) False fbxo21
TU88038 other downstream 1875046 30246887 ~ 30250240 (+) False LOC120560820
TU88040 other downstream 1876098 30247939 ~ 30250268 (+) False LOC120560820
TU88039 other downstream 1876142 30247983 ~ 30251519 (+) True LOC120560820

Expression Profile