RNA id: TU87531



Basic Information


Item Value
RNA id TU87531
length 329
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G65394
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 28755865 ~ 28756193 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtttggcccgccccctatgtttaagccacgccccctttcatacatgctgacccatttaaggtagagtcttgtgtgaggtatcattcatctcagcagaggcttcatttttaattggtgatggttggacccgccccctacgctttagccacgccccctttcacagctaatgaaccatatgacatagagtcttgtgtgaggtatcgttgaactcggcggggagttcccttttcattggtgacggtttgcggcgtccgagtgccgcgcaaatgcacggtcgcacagagcggcgtccgccggtaaccccgacgcgcgcagaagCGCGAGGGCcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87522 lncRNA upstream 134566 28621085 ~ 28621299 (+) True G65385
TU87515 lncRNA upstream 292761 28462625 ~ 28463104 (+) True G65378
TU87497 lncRNA upstream 384024 28371456 ~ 28371841 (+) True G65362
TU87444 lncRNA upstream 750744 28002539 ~ 28005121 (+) True G65314
TU87374 lncRNA upstream 850932 27903075 ~ 27904933 (+) True G65272
TU87533 lncRNA downstream 9827 28766020 ~ 28766225 (+) True G65396
TU87555 lncRNA downstream 59061 28815254 ~ 28815476 (+) True G65417
TU87556 lncRNA downstream 59992 28816185 ~ 28816400 (+) True G65418
TU87569 lncRNA downstream 89433 28845626 ~ 28847247 (+) True mboat4
TU87618 lncRNA downstream 229420 28985613 ~ 29002180 (+) True G65473
XM_039803645.1 mRNA upstream 333822 28117914 ~ 28422043 (+) True si:dkey-215k6.1
XM_039803263.1 mRNA upstream 676962 28034779 ~ 28078903 (+) True aacs
XM_039802373.1 mRNA upstream 754843 27986123 ~ 28001022 (+) False si:dkey-164f24.2
XM_039803241.1 mRNA downstream 18706 28774899 ~ 28800682 (+) True jak2b
XM_039803242.1 mRNA downstream 51160 28807353 ~ 28812996 (+) True zgc:114041
XM_039804022.1 mRNA downstream 90902 28847095 ~ 28849471 (+) False mboat4
XM_039802531.1 mRNA downstream 104318 28860511 ~ 28873349 (+) True LOC120560259
XM_039802532.1 mRNA downstream 117449 28873642 ~ 28879999 (+) True mfsd10
TU87117 other upstream 1454095 27205234 ~ 27301770 (+) True G65084
TU86927 other upstream 2097896 26645020 ~ 26657969 (+) False si:dkey-178e17.1
XR_005639500.1 other upstream 2113384 26614237 ~ 26642481 (+) False cltcl1
TU86791 other upstream 2259537 26494335 ~ 26496328 (+) False c6h22orf39
TU87830 other downstream 593931 29350124 ~ 29351753 (+) False ubac1
XR_005639517.1 other downstream 1430655 30186848 ~ 30212108 (+) False fbxo21
TU88038 other downstream 1490694 30246887 ~ 30250240 (+) False LOC120560820
TU88040 other downstream 1491746 30247939 ~ 30250268 (+) False LOC120560820
TU88039 other downstream 1491790 30247983 ~ 30251519 (+) True LOC120560820

Expression Profile