RNA id: TCONS_00074464


Basic Information

Item Value
RNA id TCONS_00074464
length 773
lncRNA type antisense
GC content 0.48
exon number 4
gene id XLOC_037933
representative False

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32096331 ~ 32105780 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCTTTTTGGCCTTTAGTTTGACAAGACTCTAACCGCAAAgcgtttttaaacagtttttttattacGGTCACCATACTCACCCTTTCCTAAGGTCTTCGACAGCTTGGGACTTCTGCAAGCTGCACTATCATCTCGTTCATCAGCGACAATGAGCTCATCTGTGGAATCGTCTCGGCCCACCAGCAGGGAGTAATCAATGATGAGGTGGCTGGACAGGAAGAGCGCGTCGCTGTGGATGGCAGCACGCAGGATGGCCTTGCAGTGCGAGCGAATATAAAGGGGATTGTCATGCACCAGTTTGAGCAGGTTCTCATCTAGGAGCACCACCTCACAGCTCTCCTTTCCCTGGTCCGTCTTCACGTTCCTGTTTCTCAGCGATCCTTTCAGGTCAAACACCTGCACAAACACCAGATAACATTAAAAGGTTTTCCATCACAAGCAGGTCAAGCTTCTTCTCAGTGTTGTTCTGGGAGTTCTTGTAGCCGATGCGGTACACTCCCAGAATCTTAGCAAGTGCTGTGGGTCGCTGTTGCACAGATGCAAGAACATGTTGCCTTATACAAAGGTTGTCTGTGTCTGCCTGGGCTAGGAGGAACAGATAGACGTTTTCTGCCTTTCTCTTGCTGGAACAGTTCTTGAAGTCTGAAGATGATAATAAATCAGTTCTGCTGTTATGAGACTGCCTCAACTGCCTTCATTCCTATAGCTGTATGAATCCAGTTCTCACCTGTTGTTCCAGGactgcagggtttcacacaagcCCTGTTTTTTG

Function

GO:

id name namespace
GO:0061982 meiosis I cell cycle process biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDART00000132448

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074988 lncRNA downstream 37997 32057706 ~ 32058334 (-) True XLOC_037932
TCONS_00075387 lncRNA downstream 286284 31797845 ~ 31810047 (-) True XLOC_037930
TCONS_00074459 lncRNA downstream 315865 31755081 ~ 31780466 (-) True XLOC_037928
TCONS_00074460 lncRNA downstream 333075 31758633 ~ 31763256 (-) False XLOC_037929
TCONS_00074443 lncRNA downstream 824405 31264412 ~ 31271926 (-) False XLOC_037924
TCONS_00074469 lncRNA upstream 68600 32174379 ~ 32175263 (-) True XLOC_037935
TCONS_00074989 lncRNA upstream 91549 32197328 ~ 32205427 (-) False XLOC_037937
TCONS_00074990 lncRNA upstream 94871 32200650 ~ 32209640 (-) False XLOC_037937
TCONS_00075388 lncRNA upstream 97296 32203075 ~ 32205543 (-) True XLOC_037937
TCONS_00074991 lncRNA upstream 109378 32215157 ~ 32221673 (-) False XLOC_037938
TCONS_00074463 mRNA downstream 180908 31838044 ~ 31915423 (-) True XLOC_037931
TCONS_00074462 mRNA downstream 333085 31760154 ~ 31763246 (-) True XLOC_037929
TCONS_00074457 mRNA downstream 349225 31696131 ~ 31747106 (-) False XLOC_037927
TCONS_00074458 mRNA downstream 349225 31696132 ~ 31747106 (-) True XLOC_037927
TCONS_00074456 mRNA downstream 500315 31592230 ~ 31596016 (-) False XLOC_037927
TCONS_00074466 mRNA upstream 4132 32109911 ~ 32142311 (-) False XLOC_037934
TCONS_00074467 mRNA upstream 4132 32109911 ~ 32158288 (-) True XLOC_037934
TCONS_00074468 mRNA upstream 55844 32161623 ~ 32177117 (-) False XLOC_037935
TCONS_00074470 mRNA upstream 84891 32190670 ~ 32191620 (-) True XLOC_037936
TCONS_00074477 mRNA upstream 180826 32286605 ~ 32300783 (-) False XLOC_037943
TCONS_00074461 other downstream 334802 31759506 ~ 31761529 (-) False XLOC_037929
TCONS_00074451 other downstream 571302 31518754 ~ 31525029 (-) False XLOC_037926
TCONS_00074446 other downstream 782007 31274108 ~ 31314324 (-) True XLOC_037925
TCONS_00074442 other downstream 908472 31187738 ~ 31187859 (-) True XLOC_037923
TCONS_00074437 other downstream 1388377 30707839 ~ 30707954 (-) True XLOC_037916
TCONS_00074471 other upstream 94871 32200650 ~ 32205543 (-) False XLOC_037937
TCONS_00074475 other upstream 154035 32259814 ~ 32264658 (-) False XLOC_037940
TCONS_00074476 other upstream 168529 32274308 ~ 32279187 (-) True XLOC_037942
TCONS_00074481 other upstream 249456 32355235 ~ 32358665 (-) True XLOC_037945
TCONS_00074482 other upstream 419476 32525255 ~ 32525371 (-) True XLOC_037946

Expression Profile

//