RNA id: TU90822



Basic Information


Item Value
RNA id TU90822
length 591
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G67972
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38825291 ~ 38825971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGCTTGTTGTGGTAAGCGATGTAAACCACCGCTACCAGCACAGCCGTACAGACCAGGTAGGCAAAGAAGTGACTGCTTTCTGCCTCGTCCTTTAAATCTGACGGGTCATACGGGCTTCTCCCTCCTGCTTCTCCATTTCTGGAGTCCTCTTCTTTGAGGTTGTACTCCTTGGAGTTGTCTCCTTCAGTCTTGTCCTCAACGCCTTTGTCTCCTTCTGTCTTGTCCTCATTGCCTTTGTCTCCTTCAGTCTTGTCCTCAACGCCTTTGTCTCCTTCTGTCTTGTCCTCAACGCCTTTGTCTCCTTCTGTCTTGTCCTCATTGCCTTTGTCTCCTTCTGTCTTGTCCTCATCGCCTTTGTCTCCTTCTGTCTTGTCCTCAACGCCTTTGTCTCCTTCTGTCTTGTCCTCATTGCCTTTGTCTCCTTCTGTCTTGTCCTCATTGCCTTTGTCTCCTTCTGTCTTGTCCTCATGGCCTTTGTCTCCTTCTGTCTTGTCCTCACCGTCTCCTTCCATCTCGTCCTTCTTGGCGTTGTCTCCTTCTGGCTCCTCGTCTTTCCCTCCAGACTCTGCAGGCGTCCGTGCATTGTTATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90814 lncRNA downstream 39974 38782839 ~ 38785317 (-) False G67969
TU90815 lncRNA downstream 39974 38784358 ~ 38785317 (-) True G67969
TU90804 lncRNA downstream 106533 38718238 ~ 38718758 (-) True G67964
TU90793 lncRNA downstream 169317 38633760 ~ 38655974 (-) True G67954
TU90759 lncRNA downstream 378505 38445979 ~ 38446786 (-) True G67926
TU90828 lncRNA upstream 699 38826670 ~ 38859201 (-) False G67976
TU90830 lncRNA upstream 30014 38855985 ~ 38917447 (-) True G67976
TU90840 lncRNA upstream 139782 38965753 ~ 38966009 (-) True G67986
TU90853 lncRNA upstream 307067 39133038 ~ 39133869 (-) False G67996
TU90854 lncRNA upstream 307367 39133338 ~ 39133869 (-) True G67996
XM_039802708.1 mRNA downstream 151399 38662069 ~ 38673892 (-) True ube2d4
XM_039802706.1 mRNA downstream 167758 38637016 ~ 38657533 (-) False dbnlb
XM_039803740.1 mRNA upstream 19716 38845687 ~ 38847953 (-) True zgc:153044
XM_039803762.1 mRNA upstream 540706 39366677 ~ 39394822 (-) False mn1b
XM_039803761.1 mRNA upstream 540706 39366677 ~ 39394822 (-) True mn1b
XM_039803696.1 mRNA upstream 585575 39411546 ~ 39447216 (-) False LOC120560826
XM_039802872.1 mRNA upstream 623962 39449933 ~ 39841426 (-) True LOC120560407
unassigned_transcript_272 other downstream 389801 38435418 ~ 38435490 (-) True trnaf-gaa_7
unassigned_transcript_270 other downstream 398518 38426701 ~ 38426773 (-) True trnaf-gaa_5
TU90333 other downstream 1270524 37538187 ~ 37554767 (-) True G67577
TU90329 other downstream 1277981 37538187 ~ 37547310 (-) False G67577
TU90337 other downstream 1280413 37535859 ~ 37544878 (-) False G67577
TU90908 other upstream 587911 39413882 ~ 39425293 (-) False LOC120560826
TU90909 other upstream 587911 39413882 ~ 39425293 (-) False LOC120560826
TU90911 other upstream 587911 39413882 ~ 39425293 (-) False LOC120560826
TU90912 other upstream 602310 39428281 ~ 39447195 (-) False LOC120560826
TU91941 other upstream 1109401 39935372 ~ 39935846 (-) True G68717

Expression Profile