RNA id: TCONS_00074513


Basic Information

Item Value
RNA id TCONS_00074513
length 1086
RNA type mRNA
GC content 0.40
exon number 5
gene id XLOC_037971
representative False

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33115926 ~ 33121673 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGAAGAGGACAAGTGAAGAGgtgtTTTATGGTTGAAAAAGACCAGGCTGAAATCAATGCCTTCCGTAAGGTGTTTAACGAGTCAGACATTCTCCTTTGTTGGTACCATGTAATGCAAGCAGTAACTTGTTGGCTGTCAATATCTGAATCTGGTGTGAGTGGACCTGAAAAGGCAGATTCAAGAGCGCACATCATACAGTTTATGTCAGAGATGAAATGCTGTTCAAAGGCACAAGAATTTAAGGAAAAGGCTGAGATGTTTCACTGCCAGTTTAGGAACTTCAAATATGTCTGCAAGTACTTCAGGAACAACTTGGAGACAATTGGTCATCTGTGGTCTAACTTTGGAAGATGCTATAAAAAGAGACTCTGACGCAAACAgggagactggtctgaaatacaTGATACCCCCATGAAAAAcagaagtgttggcaggtgtgcttaccagtttaatatttgatctgctatagttagaaatcagactgttatatcttTTAAgcgtaacgcctgtttcacaccgcaagcgtcagcggtgCGTGTTTTtttggcgtccatgttaacagattacaGCTTTCATACCgtacgcagaagcagcagtgcagcgatagtttcggcgctgggtctatttttgacgcactgctcacgctcaattaaagtgacagtgcattgataatgacctaaatacattgaatgacagtaaaaagtaacaATTTTACTCAATAAATGCGTCAATAATATCAACTGAtgtatatatagtcaatcaaatgaacttaaaccattaaaaactgcaacaaacctTTATTtcggcccgaactacaaaaccaatagttaaacaattttagtatcagttttctTGGCGAGGGGAAGTGATTTACGGGAATTGTAGTCCATAgcaaagtgtattgtgggtagtgtagttcgacatgCATACTGGATGATGTGAACTCGCTGTGTGCTGTGCTGCTCAAGCAGAGGAAGAAAGCTTTATTCGGCTTTGCTTTATGTTCGCTCAAGTTATTTCACCTGgtagctgtttgcactgtgaacctgacaacacgaaaataagtaaaagaagggcATGCATTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-42 No description available

Ensembl:

ensembl_id ENSDART00000166371

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075393 lncRNA downstream 174698 32937829 ~ 32941228 (-) True XLOC_037966
TCONS_00074505 lncRNA downstream 268442 32846154 ~ 32847484 (-) True XLOC_037963
TCONS_00074504 lncRNA downstream 271039 32844013 ~ 32844887 (-) False XLOC_037963
TCONS_00074500 lncRNA downstream 311018 32801738 ~ 32804908 (-) True XLOC_037960
TCONS_00075000 lncRNA downstream 320042 32772475 ~ 32795884 (-) True XLOC_037958
TCONS_00075396 lncRNA upstream 56113 33177648 ~ 33179016 (-) True XLOC_037973
TCONS_00075397 lncRNA upstream 79980 33201515 ~ 33202904 (-) False XLOC_037974
TCONS_00075398 lncRNA upstream 235116 33356651 ~ 33359044 (-) True XLOC_037977
TCONS_00074529 lncRNA upstream 260185 33381720 ~ 33394953 (-) False XLOC_037978
TCONS_00074535 lncRNA upstream 637185 33758720 ~ 33781851 (-) True XLOC_037981
TCONS_00074512 mRNA downstream 8689 33097289 ~ 33107237 (-) True XLOC_037969
TCONS_00074510 mRNA downstream 33948 33080438 ~ 33081978 (-) False XLOC_037968
TCONS_00074511 mRNA downstream 34145 33080440 ~ 33081781 (-) True XLOC_037968
TCONS_00074508 mRNA downstream 52843 33061564 ~ 33063083 (-) False XLOC_037967
TCONS_00074509 mRNA downstream 53035 33061565 ~ 33062891 (-) True XLOC_037967
TCONS_00074516 mRNA upstream 13347 33134882 ~ 33136990 (-) True XLOC_037972
TCONS_00074517 mRNA upstream 80371 33201906 ~ 33202239 (-) True XLOC_037974
TCONS_00074522 mRNA upstream 201569 33323104 ~ 33329787 (-) False XLOC_037976
TCONS_00074523 mRNA upstream 201575 33323110 ~ 33328948 (-) False XLOC_037976
TCONS_00074525 mRNA upstream 203677 33325212 ~ 33329700 (-) True XLOC_037976
TCONS_00074506 other downstream 230745 32883291 ~ 32885181 (-) True XLOC_037964
TCONS_00074498 other downstream 330389 32785417 ~ 32785537 (-) True XLOC_037959
TCONS_00074494 other downstream 368132 32745088 ~ 32747794 (-) False XLOC_037956
TCONS_00074518 other upstream 125667 33247202 ~ 33249282 (-) False XLOC_037975
TCONS_00074519 other upstream 125828 33247363 ~ 33250079 (-) False XLOC_037975
TCONS_00074520 other upstream 125831 33247366 ~ 33251006 (-) False XLOC_037975
TCONS_00074521 other upstream 127743 33249278 ~ 33250994 (-) True XLOC_037975
TCONS_00074524 other upstream 203337 33324872 ~ 33328944 (-) False XLOC_037976

Expression Profile

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