RNA id: TCONS_00074519



Basic Information


Item Value
RNA id TCONS_00074519
length 587
RNA type processed_transcript
GC content 0.36
exon number 4
gene id XLOC_037975
representative False

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33247202 ~ 33251006 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


accatagatttagattaattaatgttaagtcttattttactcttattatatttatctgtttttcagctacagtaattgatgttgaaaaactgatgcaaCCAATtactcctcacttgattattcaagcccagattgtgatggacctggaatgcgacaccagttactcttaagacaagaaccgaataatgcacagatgtggagggatttgcagccaaactaacttgagggaaggaacctttagTGTGGGTGAACAaactacctggatgtccaacaaaggctgcacaagagctcatttgatagcacacattctgtcctgtctacatctctgatgacctggaagtgcttcgacatcagatcatcagaagtgctgctgccctttttcactgtccctttccacatcatttggccttcatcatttcctgtcttgtagcagtatttttacctgtttttaaaattgtaataatttttgatgcattaattgttgactggttttaatgatcaattgtttattagtgttctgttgctttgttatattgaattattgctactgttttagcatggtttacacaataaacctttattttgaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143037

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00075397 lncRNA downstream 44459 33201515 ~ 33202904 (-) False XLOC_037974
TCONS_00075396 lncRNA downstream 68347 33177648 ~ 33179016 (-) True XLOC_037973
TCONS_00075394 lncRNA downstream 125249 33110204 ~ 33122114 (-) True XLOC_037970
TCONS_00075398 lncRNA upstream 106572 33356651 ~ 33359044 (-) True XLOC_037977
TCONS_00074529 lncRNA upstream 131641 33381720 ~ 33394953 (-) False XLOC_037978
TCONS_00074535 lncRNA upstream 508641 33758720 ~ 33781851 (-) True XLOC_037981
TCONS_00075399 lncRNA upstream 533476 33783555 ~ 33785153 (-) False XLOC_037982
TCONS_00074539 lncRNA upstream 534009 33784088 ~ 33785153 (-) True XLOC_037982
TCONS_00074517 mRNA downstream 45124 33201906 ~ 33202239 (-) True XLOC_037974
TCONS_00074516 mRNA downstream 110373 33134882 ~ 33136990 (-) True XLOC_037972
TCONS_00074514 mRNA downstream 125776 33116078 ~ 33121587 (-) False XLOC_037971
TCONS_00074513 mRNA downstream 125828 33115926 ~ 33121535 (-) False XLOC_037971
TCONS_00074512 mRNA downstream 140126 33097289 ~ 33107237 (-) True XLOC_037969
TCONS_00074522 mRNA upstream 73025 33323104 ~ 33329787 (-) False XLOC_037976
TCONS_00074523 mRNA upstream 73031 33323110 ~ 33328948 (-) False XLOC_037976
TCONS_00074525 mRNA upstream 75133 33325212 ~ 33329700 (-) True XLOC_037976
TCONS_00074526 mRNA upstream 116604 33366683 ~ 33477588 (-) False XLOC_037978
TCONS_00074527 mRNA upstream 116624 33366703 ~ 33608427 (-) False XLOC_037978
TCONS_00074506 other downstream 362182 32883291 ~ 32885181 (-) True XLOC_037964
TCONS_00074498 other downstream 461826 32785417 ~ 32785537 (-) True XLOC_037959
TCONS_00074494 other downstream 499569 32745088 ~ 32747794 (-) False XLOC_037956
TCONS_00074524 other upstream 74793 33324872 ~ 33328944 (-) False XLOC_037976
TCONS_00074528 other upstream 131170 33381249 ~ 33382466 (-) False XLOC_037978
TCONS_00074530 other upstream 188883 33438962 ~ 33439565 (-) True XLOC_037978
TCONS_00074537 other upstream 533476 33783555 ~ 33784507 (-) False XLOC_037982
TCONS_00074543 other upstream 670853 33920932 ~ 33921024 (-) True XLOC_037984

Expression Profile


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