RNA id: TCONS_00074521


Basic Information

Item Value
RNA id TCONS_00074521
length 851
RNA type processed_transcript
GC content 0.33
exon number 3
gene id XLOC_037975
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33247202 ~ 33251006 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

caacggctctcctaatttgaaattcacctgtcgtgtttcatccagcgaattcatcctcgcacaacactgagatgaaggcgaagtcaccatgaaaagttaaacgtttaccgttaagctacagtaattgatgttgaaaaactgatgcaaCCAATtactcctcacttgattattcaaggtaatgttgatgtcttcctaattttgattagatttttaaatgtcaagttgttcacagatttgttgtgaggagtttcatgtacaacctctttttcttcttccagcagttcctaagataaaaaaaaaatctggtgttaaaacagccacggctatgctatttgcctaccaagtgctgagtaaatattagacaaacattttttctataactgttgtctttgtgtttattagcaattttactgggcgtatgtgtttgtttgttttttcaaacagcctggaaactgtaagtttagttcagtatgttattttatgctattcatttttgtcttaacatggattgcatgttgaagctatcgttttatagtgggaaaatgtaaaagagaatcactgaatacaatggcataatgattctgttTGTTCACagaaggtacttgatttagttttcctcaagcgacacatcagtttttatgactattgctttgacacttgaattgaagggacagttcaccccaaaatgaaaataatagcatctttggcatcctccattgtttcaaaatagttatatatttaatttgttccgttgaacacaaactcgtattttttaaagaaatttggttcaaatatggatgtcaatagttactggttactaacattcttcaaaatatctgctttagtgttta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000139391

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075397 lncRNA downstream 46374 33201515 ~ 33202904 (-) False XLOC_037974
TCONS_00075396 lncRNA downstream 70262 33177648 ~ 33179016 (-) True XLOC_037973
TCONS_00075394 lncRNA downstream 127164 33110204 ~ 33122114 (-) True XLOC_037970
TCONS_00075398 lncRNA upstream 105657 33356651 ~ 33359044 (-) True XLOC_037977
TCONS_00074529 lncRNA upstream 130726 33381720 ~ 33394953 (-) False XLOC_037978
TCONS_00074535 lncRNA upstream 507726 33758720 ~ 33781851 (-) True XLOC_037981
TCONS_00075399 lncRNA upstream 532561 33783555 ~ 33785153 (-) False XLOC_037982
TCONS_00074539 lncRNA upstream 533094 33784088 ~ 33785153 (-) True XLOC_037982
TCONS_00074517 mRNA downstream 47039 33201906 ~ 33202239 (-) True XLOC_037974
TCONS_00074516 mRNA downstream 112288 33134882 ~ 33136990 (-) True XLOC_037972
TCONS_00074514 mRNA downstream 127691 33116078 ~ 33121587 (-) False XLOC_037971
TCONS_00074513 mRNA downstream 127743 33115926 ~ 33121535 (-) False XLOC_037971
TCONS_00074512 mRNA downstream 142041 33097289 ~ 33107237 (-) True XLOC_037969
TCONS_00074522 mRNA upstream 72110 33323104 ~ 33329787 (-) False XLOC_037976
TCONS_00074523 mRNA upstream 72116 33323110 ~ 33328948 (-) False XLOC_037976
TCONS_00074525 mRNA upstream 74218 33325212 ~ 33329700 (-) True XLOC_037976
TCONS_00074526 mRNA upstream 115689 33366683 ~ 33477588 (-) False XLOC_037978
TCONS_00074527 mRNA upstream 115709 33366703 ~ 33608427 (-) False XLOC_037978
TCONS_00074506 other downstream 364097 32883291 ~ 32885181 (-) True XLOC_037964
TCONS_00074498 other downstream 463741 32785417 ~ 32785537 (-) True XLOC_037959
TCONS_00074494 other downstream 501484 32745088 ~ 32747794 (-) False XLOC_037956
TCONS_00074524 other upstream 73878 33324872 ~ 33328944 (-) False XLOC_037976
TCONS_00074528 other upstream 130255 33381249 ~ 33382466 (-) False XLOC_037978
TCONS_00074530 other upstream 187968 33438962 ~ 33439565 (-) True XLOC_037978
TCONS_00074537 other upstream 532561 33783555 ~ 33784507 (-) False XLOC_037982
TCONS_00074543 other upstream 669938 33920932 ~ 33921024 (-) True XLOC_037984

Expression Profile

//