RNA id: TU93018


Basic Information

Item Value
RNA id TU93018
length 1804
RNA type TUCP
GC content 0.56
exon number 13
gene id LOC120560198
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43665787 ~ 43709261 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCAGAAACCCAAACAACAGAAACAAGAGAGGGACACATTAGTTAGACTGTTGGATAGTTAGACTGTTGGTTAGATAGACTGTTGGTTAGATAGACTGTAGGTTAGTTAGACTGTTGGTTAGATAGACTGTTGGATAGTTAGACTGTGGGTTAGATAGACTAAGGGTTAGTTAGACTGTTGGTTAGTTAGGGTTGTTAGATAGACTGCAAGATAGTTAGGGTTGTTAGATAGTTATGGTTGTTGGATAGTTAGGATTGTTGGTTATTTAGACTGTGGGTTAGTTAGACTGTTAGTTGGACTGCAGGATACTTAGGGTTGTAGGTTAGTGCAGATCTTCATGGACCCGTCTGTGTGCAGCAGGAAGAGAGCTGTGCTCCAGCTGCACCAGGAGGCCCAGTGTCAGCCTCCAGCCTGGAAGAGGAGgcgcagagaggaggaggaggagatgaagaggaggacaAGAGGAGGCTGTAAGGAGAACAGAGATCCTGGAGATCAGGGCAGGAACTGGAGAACACAGAACCTGAAGAGAGAACATAGACGCTTCTCTCCGTCTGGAAGCAGAACCAGGACCGCTGCTGGGACCGGATCTGAGGCTGGAGGTGAGGTCTGGTTCTGCAGAACTGACGTCAGAGTGGCCCGGATCAAGAAGACCAGGACCCAGACCTCGGCCCAGACTGAATGTGGTCCGGGTTTAATTCTCCCGGACCAGACTAATCCTGGATCTACCGAGACCCAGACGGACCGGAGGAGACATACCCGGACCGCAGAGTCCAGGTCTGAGGACCATACCAGGTCCACAGCTGGCCCGTCCTCAGAGACCAGGACCAGCAGTTCTGAGAGAGTCCCGGGTCCATCCAGGACCAGGTCCAGGTCTGAgaccaggaggaggaggaagatccAGCCGTCTGTGTTCCGAGGCAGAGGTCGGCTGCGGCTGTCCATCTCTGCAGAGGCGGGACAACTCGTCATCCACATCCACGAGGCCAGAGGGCTGATGGGAAACTCTCCAAGCTCCTATGTCACGctggcagtgacctctgacctcagcATCAGGATGAAGACTCCGACCATCTGGAACAACAAGAACCCAGAATACAACCACAAGTTTACActGTGTGTCAGCGATGACGTCGTCCCAAACAGGTTGTTGGTTTCAGTCTTCAGCAGCTGCCGCCAGCTGATTGGCTGTATGAGCTTTGGGATTGGTTCCTCTCAGCTTGTCTCCGGTTGGTTCTACCTGCTGGGTGAGGAGTTTGGGCGGACCAAACACCTGAGAGTGACATCACAGCGGAACAAGCCAATGAGGAGCCTGGAGGACGGTTCAGCGCGCTGCGCAGAACTCCGAAGCACTCCAGACCTGGCTCCAGATGCCAACGTGAACCGCACCGCAGCCGCGCTGACCCACAGCGCCGCCCTGACCCACAGCACCGCTGGACCCAGAGACCGGACGAGCCCCGTCCTCGCCCTCTCCAGAACCAACCCCAAAACCAgcagctccagctccagctcTGGTCCGGCCAGCAGCGTCCACAGCTGCTGCATTTCCACGCTATACGCCGACTCCACCCAGCGCCAGGTGACCCGGGACAGCGGCAACACCCGCCGGCTGACGGTGAGCATTGTTCGAGGAAACGATGGATTTGGATTCACGATCTGCTCCGACTGTCCAGTCCGAGTCCAGGCTGTCGACCCTGGCGGCCCGGCTCACCAGTCTGGTCTCCGCCAGGGAGACTCGGTCCTGCAGCTCAACGGACTTCCTGTAGAAACCTGGAAGTGTGTCGACCTCGCCCACGCCATCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93001 lncRNA downstream 30011 43650145 ~ 43650465 (-) True G69404
TU92973 lncRNA downstream 95131 43584921 ~ 43585345 (-) True G69379
TU92972 lncRNA downstream 114262 43565439 ~ 43566214 (-) True G69378
XR_005639455.1 lncRNA downstream 117877 43558378 ~ 43562599 (-) False LOC120560250
XR_005639454.1 lncRNA downstream 117877 43558378 ~ 43562599 (-) False LOC120560250
TU93066 lncRNA upstream 30620 43739856 ~ 43804845 (-) False G69454
TU93067 lncRNA upstream 34044 43743280 ~ 43755105 (-) True G69455
TU93079 lncRNA upstream 60104 43769340 ~ 43771545 (-) True G69463
TU93089 lncRNA upstream 88543 43797779 ~ 43798311 (-) True G69472
TU93064 lncRNA upstream 92316 43801552 ~ 43804845 (-) True G69454
XM_039802492.1 mRNA downstream 28941 43590044 ~ 43651535 (-) True LOC120560219
XM_039802483.1 mRNA downstream 98164 43557717 ~ 43582312 (-) False fibcd1a
XM_039802482.1 mRNA downstream 98164 43557717 ~ 43582312 (-) False fibcd1a
XM_039802481.1 mRNA downstream 98164 43557717 ~ 43582312 (-) True fibcd1a
XM_039802526.1 mRNA downstream 128488 43531233 ~ 43551988 (-) True phf19
XM_039804563.1 mRNA upstream 100393 43809629 ~ 43821302 (-) True endog
XM_039803759.1 mRNA upstream 123161 43832397 ~ 43868090 (-) False LOC120560874
XM_039803757.1 mRNA upstream 123161 43832397 ~ 43868089 (-) False LOC120560874
XM_039803756.1 mRNA upstream 123161 43832397 ~ 43868087 (-) False LOC120560874
XM_039803754.1 mRNA upstream 123161 43832397 ~ 43868087 (-) False LOC120560874
TU92966 other downstream 133918 43541243 ~ 43546558 (-) False phf19
TU92928 other downstream 299877 43371767 ~ 43380599 (-) True G69356
TU92812 other downstream 429181 43250758 ~ 43251295 (-) False LOC120561119
TU92775 other downstream 461582 43211019 ~ 43218894 (-) True G69249
TU92756 other downstream 501505 43173165 ~ 43178971 (-) False pomt1