RNA id: XM_039802266.1


Basic Information

Item Value
RNA id XM_039802266.1
length 7338
RNA type mRNA
GC content 0.49
exon number 55
gene id pi4kab
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26687332 ~ 26719116 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTCGTTTGATGTAGCGTTAGTAGTGGTAAACATGTCTGTAATGGGAGGCGGTACGAGAGGGTTTTACTTCAACACAGTCCTGTCGCTGGCCCGCTCTTTAGCTGCCCACAGTCCCGCACCGGTCGAAAAGGTCCAGAAGCTACAATGTATGTGTCCAGTGGAAGTCCGCGGTGTGTTCACTCTAGATGTGCGTCGCAGAGATGCTGTTATTGCGTTGGCTGTGTTTTTGGTGGAATCTGGCTTACAGCACAAAGACATACTTGTTTCCTACTTGCTGAGCCTATTGAGAGGGCTACCGCGGGTCCAATGGATCGAAGAAAGCtcaggaaagaaaggaaaggAATATCTCCCAGTCGCAGAAAACTTCAGCTACTGTCTAGTGACTCTTTTAGCAGATGTGGCTCAGAGGGACCCAGACTCCCGACAAGAGATCTTGAATGCTATAATGGAGGTCATGCAGTCATTGCAGGACATGTGCCAAACACCTGATAATCATGacaaagTCTACTTGTGCAGGTATACTGTCCCCAGCCTGCTCGGCATGACTCGAGCTTTTGGCCGCTACAGCTACACAGACGAAGCCCTGTTGTCCAAGCTGTTCCCCAAAGATTCGCCCCCAGCCCGCTGCGTCACAGAGGAAACAGAGGGAGTGCGGCGCAGATCCTTCAATGAATTTCGTTCTATCATGCCATCCTCGCTGCTTACAGTGTGCCAGAGTGAAACTCTGCGCAGATCCACCGGGACCAACCTGGATGCCTCTGTGCAGGTCTGTACAGATCCAGGAGGCCACTCTCCCTGCTCTCCTACAGCCCCTGGCCCGCATTACTTTGAAGGTGCCTACCTCTCAGACAGCAGCACAGTAGATCCTGACTACTATTTCTCTACAGTCAGCTCAAGTTTCTCAGTGTCTCCTCTCTTCATGGGGACTGAAAACGAGGTGGAGGTGCCCGTTGATCTGCTCCGACAGCTCCTGGGCATGGTGAAGAAGTTTGTTTCCGACTCGTTTTTGAAAGCTCTGGACGCCACTATGATGGAGGTTACAGAGTGTAATCCTGGAATCAACTTCTATTACAAAACCTTCAGTGAcactctctatgtgtgtgtgttcaaaatGCTGCGGGACACACTATACTACATGAAAGCCTTGCAGCCAGCATTTGTACGGCAAGTGCATGACTTTGTACTAGAACAGTTTAGCAGCAGTCAATCAGAGCTGCAGCGGGTACTTTATGACACGGGAGGGTTGCCGGTGGAACAGAGCCCCCTCAAGCTTCGTTGCCAAGCCAACGCTGCCTGCGTGGACCTCATGGTGTGGGCTGTCAAAGATGAGCAAGgagCTGAGAATTTGTGCACCAAACTGTCAGAGAAGCTGCAGTCGAAAACCTCCAGTAAAGTCATCATTGCTCATATGCCCCTGCTCATCTGTTGCCTACAGGGCCTTGGTCGTCTGTGTGAGAGGTTTCCAGTAGTTGCTCACTCTGCCACTACCTCTCTTAGGGATTTCCTGGTGGTTCCTTCCCCTGTTCTTATTAAACTTTATAAGTATCACAGTCAGTGCAACACAgGCACAGGAGAAATTAGGATAAATGTGACCAATGAGCACTCTCAGTCTACCTTCAACCTCCTGTCCAACAGGAAAGACCAGCCATCCATGTACGAGCAGCTCAGAGACATTTCCATTGACAACATATGCAGATGTCTGAAAGCTGGTCTGACCATGGACAATGTGATAGTGGAGGCCTTTCTGGCTAGTCTGTCGAACCGTTTATACATTTCACAGGAGAATGACAAGGATGCCCATCTGATCCCAGATCACACCATTCGAGCACTGGGCCACATTGCAGTGGCTCTGAGAGACACTCCTAAAGTCATGGAGCACATCCTACAAATCCTTCAACAAAAGTTCTGCCAGCCTCCATCACAGCTGGATGTCCTCATCATCGACCAGCTTGGCTGCATGGTCATTACAGGAAATCAATACATGTACCAGGAGGGGTGGAATCTGTTCCAGCAGATCAGTGTGAAGGCCAGCTCAGTGGTCTACTCAGCTACCAAAGACTACAGAGATCATGGCTACAGGCATTGCTCTCTGGCAGTGATAAATGCTCTGGCCAACATTGCAGCCAACCTGCAGGGGGAGCAACTCGTGGATGAGCTGATGGTGAACCTTTTAGAGCTGTTTGTCCAACTGGGCCTGGAAGGAAAGAGAGCCAGTGAGAGGGCCTCAGACAAGGGGCCAGCACTGAAGGCATCAAGTAGTGCTGGAAATCTTGGAGTCCTCATTCCGGTGATTGCTGTGTTGACCAGGCGGCTTCCGCCAATAAAAGAGGCCAAGCCCCGTCTCCAGAAGCTGTTCAGGGACTTCTGGTTGTACTCTGTGGTCATGGGTTTTGCGGTGGAAGGATCAGGGCTTTGGCCAGAGGAGTGGTATGaaggtgtgtgtgagattgCTACCACGTCTCCTCTTCTCACCTTTCCCAGTGGAGAACCTCTTCGCTCCGAACTGCAATATAACTCTGCCCTGAAAAATGATACAGTCACGCCGGCTGAGTTGAGCGATTTGCGAGCAACCATCAGCAATCTCCTCGACCCACCTCCAGAAGGATCTGCCCTCATTAACAAGCTCGACTTTGCCATGTCCACGTACCTGCTCTCAGTCTACAGACTGGAATACATGCGGATGCTACGATCCAATGATCCTGACAGGTTCCAGGTCATGTTTCGGTACTTTGAAGACAAAGCCATCCAGAAAGACAAATCTGGCATGATGCAGTGTATTATTTGTGTTAGCGATAAGGTGTTTGATGTCTTTCTCCAGATGATGGCTGAGAAGCCCAAGACCAAAGAGCACGAGGAGGAATTGGAGCGACATGCCCAATTCTTATTGATCAACTTTAACCACACCCACAAGAGGATTCGGAGAGTGGCAGACAAATACCTTTCTGGATTGGCTGAGACATTCCCCCATCTGCTTTGGAGTGGTCGTGTGTTGAAGACCATGTTGGACATCTTGCAGACACTCTCTCTATCACTAAGTGCTGACATCCACAAGGATCAGCCGTACTATGACATCCCAGACACCCCGTACAGGATCACTGTTCCTGACACATATGAGGCCAGAGAGAGCATAGTGAAGGACTTTGCTGCTCGCTGTGGTGAGATTCTGAAAGAGGCAATGAAATGGGCCCCTTCTGTCACAAAGTCCCACTTACAGGAGTACTTGAACAAGCATCAGAACTGGGTGTCGGGACTGTCCCAGCACACTGGCCTGGCCATGGCCACAGAGAGCATACTGCACTTTGCAGGCTACAACAGACAGAGTACTACACTAGGCGCTGCTTTCCCTCAGACCACCCAGCTGACAGAGAGACCTGCATGCGTGAAAAAGGACTACTCCAACTTCATGGCATCCCTCAACCTGCGCAACCGCTACACAGGAGAGGTGGCTGGTATGATCCAGTTCTCACAGGCAACTCACAGCCAGTCAGACCTCACCAAGCTGATGATCTATCAGATGACCAGTGCTCTGGACAGAAAAGACCCAGAGGCCTTCACCCAGGCCATGTTCAAGATGGCCGCTTTGCTTATAACTACCAAAAACTGCAATCCTCAGCTCCTGCACCATCTGTGTTGGTCTCCTCTGAAGATGTTTACAGAACATGGCATGGAAACTGCTATTGCCTGCTGGGAATGGCTCCTGGCTGCACACAACGGGGTGGAAGTGCCATTTATGCGGGAGATGGCAGGAGCTTGGCAGATGACAGTAGAGCTGAAGATGGGCTTGTTTTCGGAGGCTAAGGTAGAGGCCGGCCCTCTGGCTGTATCAGAGGAGAGTCAACCTGCACCCTGTGAACCTGACGTCATCCCTCACTTCCTCTGGATAGAGTTTCTGGTTCAGAGGTTTGAGATAGCCAAGTACAGCAGTGCTGACCAGGTGGAGATTTTCACCTCCATTTTGCAGAGATCTCTTTCTCTGAGTGTCGGAGGGCCCAAAAGCAGCCTGAACCGACATGTTGCTGCCATTGGACCAAGATTTAGACTGCTGACTCTGGGTCTGACTCTTTTGCATTCTGATGTTGTGACAAATGCCACCATCAGAAATGTTCTGCGAGAGAAGATCTATTCATCGGCTTTTGACTACTTCAGtGCCACTCCCAAATTCCCCACTCAGGCTGATAAGAGGCTGAGAGAAGACATCAGTATAATGATCAAGTTCTATGCCAGCCTGCAGTCTGACAAAAAGTATCTGGCTGCCAACCAGCTGGTTCCCCCAGGGGCAGATAGCAGGAACAGTCTTGATGCCGCTATGGGCCAGAGGCAGCAGGTGACTCAGGGATGGATCAACACCTACCCTCTGTCCTCTGGGATGTCCACCATATCCAAGAAATCAGGACTGTctaaaaaaagcaacagaggCACACAGCTGCACAAGTACTACATGAAACGTCGGACTCTTTTACTGGCTTTACTGGCCAGCGAGATTGAGCGGCTGACAATATGGTACAACCCGTTATCCACTCAGGAGCTTGCTATTGCTACTGAACAGTCGGTGGAAACCAGCATTGCTAACTGGAGGTCCAAATACATCAGTCTGACAGAGAAACAGTGGAAGGACAACATCAACCTGGCCTGGAGCATAGCACCTTACCTTGCCCTGCAGCTGCCTGCCAGatttAAAAACACAGAGGCGATTGTCTCAGAGGTGACTCGCCTAGTGCGAATGGATCCGGCTGCTGTGTGTGATGTTCCAGAAGCAGTCAAGtTCCTTGTGACGTGGCACACAATTGATGCTGACTCTCCAGAGCTAAGTCATGTCCTGTGCTGGGCCCCAGCAGATCCCCCAACTGGACTGTCTTACTTCTCCTCTATGTACCCTCCTCACCCCCTCACAGCCCAGTACGGGGTCAAAGTACTCCGTTCCTTTCCTCCTGATgccattttgttttacattccTCAAATTGTCCAAGCGCTTCGTTATGACAAGATGGGTTATGTGAGAGAGTACATCCTGTGGGCCGCTCAGAAGTCTCAGCTGCTGGCTCACCAGTTCATCTGGAACATGAAGACCAACATATACCTGGACGAGGAAGGAAACCAGAAAGACCCTGACATAGGTGAGCTGCTGGAGCAGATGGTGGAGGAGATCACTGGCTCTCTGTCTGGCCCGGCCAAAGACTTCTACCAGAGAGAGTTTGATTTCTTCAACAAGATCACCAATGTGTCAGCCATTATCAAACCTTTTCCCAaaggggaggagagaaagagggccTGCCTGGAAGCCATGTCACAGATCAAAGTCCAACCCGGATGTTATCTTCCTAGTAACCCAGAGGCCATAGTtttggatatagactacaagtCTGGGACCCCCATGCAGAGTGCTGCCAAAGCTCCCTACCTGGCCAAATTTAAAGTTAGGAGGTGTGGAGTCAGTGAGCTGGAAAAAGAAGGTCTGAAGTGTTGCTCAGATTCTGGAGATGAGGTGAAGAGTGAAGAGGAGGCCAAGAGAATCTGCTGGCAGGCGGCCATCTTTAAAGTGGGAGACGACTGCAGACAGGACATGCTGGCTCTTCAGATCATCAGCCTGTTTAAGAACATCTTCCAGCTGGTCGGCCTGGATCTCTATGTGTTTCCTTACAGGGTGGTGGCCACAGCCCCTGGATGTGGAGTGATCGAGTGCATCCCAGACTGCAAGTCTCGTGACCAGCTGGGCCGACAGACTGACTTCGGCATGTACGACTATTTCAGGAACCAGTATGGAGATGAATCCACATTAGCGTTCCAGAAGGCACGGTACAACTTCATCCGCAGCATGGCAGCTTACAGCTTGTTGCTCTTCCTGCTACAGATAAAAGACAGACACAACGGCAACATCATGCTGGATAGCCAGGGCCACCTTATCCACATCGACTTCGGGTTCATTTTTGAAAGCTCTCCTGGTGGGAACCTCGGCTGGGAGCCAGATATCAAGCTGACCGATGAGATGGTGATGATCATGGGTGGGAAGATGGAGGCGACGCCCTTCAAATGGTTCATGGAGATGTGTGTGAGGGGATACTTGGCTGTCAGGCCCTACATGGATGGAGTGGTCTCCTTGGTTACACTCATGCTGGACACTGGCCTTCCCTGCTTCAGAGGACAGACCATCAAATTGCTCAAGCAGCGGTTCAACCCTGGTTTGAGTGAGAAAGATGCAGCTTCCTTCATCATCAAAGTCATCCAGAACTGCTTCCTCAGCAACAGGAGTAGAACCTACGACATGATCCAGTATTACCAAAACCAGATCCCATACTAAACGTCTGTGCCTAAGCATGTGCATGTATTGGCTGGTAcatagtgtgcgtgtgtgcgtttgcGCATGTACCTTTGTTAATGTTCAACATTGAAGATTGTGGCTCATTGTTTCTGCTGATTGTTggatgttgtgttttgtgtttgcgtAAGCTTCTTGTTTCCTCTTAAACCATATTTTCTTTGTATCTGTTGTCTATTCCCTTatttattatgttatgttaaaaTCAATGttgttattaattattatattattgcacTGGCTTCTGTGCACTTAGAGAAAAAAACTCTTGGTAATCTGCACATTCAGTAAATACTTAACCAGAGTTTGTgccaattttaaaatgtttgtgaaTGTGGATTCTTAGAGCTGTTGATTTTAGATGGGGTTTTAAATGTAATTGGATACTTGAAGTAACTGAAGTAGACCGGTTTCAGTTCTGACCGATGTGGCCTATTCTGTCATCTTGTACTTGACTGTACTACTGTGCTTCTCTTTTTAATGGACCAGTCTGAGTTCTTTGAGCTGTAGCATGGTACTTGTCTTGTATTTAACAGTGACGACTGACTGTATATACATGAGTTACACCGTCTGTATTTTTGGGTTTCCGTATTTGCAGTTACCAAGGGGAGAAACGATGAACACCAGTTCAGAGAAACACTGGGACTGAGTTTTGTATATTTAGCATTCATTGCCAAAGGGGGAGGGAAGATAGTGCACATAAATCTAACTTTTCTATGGTTTGTGGATGAAGGTAAGACACAGCTTGAATGTTGGGCAGTTGCATGAAGTTTCATGGTTAACCACCATGTAGCCTGTGTCCAATGTGGCTTCTGGTGAAAGTAACTTTAGTAATCCAAAGTGCTGTGCCCCTTGTCCATATGGATAGCTTAAGCCTTTATGTAATGTTACTGATTGTAAAGATTTTGCCTCTTTGTATATTTATATCCATGGCCCATTTTCTGTCTCCTTTTCTATCTTCATGCCTTTTGAATGCGAATGCATAAGATAAGAAATCAAATAAAGATCTATTAACTTAAAGAAA

Function

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0048015 phosphatidylinositol-mediated signaling biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86940 lncRNA upstream 3143 26682518 ~ 26684255 (+) True G64944
TU86926 lncRNA upstream 23872 26662767 ~ 26663526 (+) True G64930
TU86879 lncRNA upstream 106585 26572244 ~ 26580813 (+) True G64893
TU86818 lncRNA upstream 146762 26540415 ~ 26540636 (+) True G64841
TU86816 lncRNA upstream 147175 26538658 ~ 26540223 (+) True G64840
TU86951 lncRNA downstream 42275 26761391 ~ 26829185 (+) True G64949
TU86978 lncRNA downstream 174585 26893701 ~ 26896143 (+) True G64967
XR_005639508.1 lncRNA downstream 178786 26897902 ~ 26899558 (+) True LOC120560738
TU87101 lncRNA downstream 317937 27037053 ~ 27039599 (+) True ndufs4
TU87102 lncRNA downstream 319694 27038810 ~ 27039599 (+) False ndufs4
XM_039802270.1 mRNA upstream 7400 26666733 ~ 26679998 (+) True si:dkey-178e17.3
XM_039802271.1 mRNA upstream 7400 26666733 ~ 26679998 (+) False si:dkey-178e17.3
XM_039804533.1 mRNA upstream 25503 26644661 ~ 26661895 (+) True si:dkey-178e17.1
XM_039803340.1 mRNA upstream 43231 26614238 ~ 26644167 (+) False cltcl1
XM_039804018.1 mRNA downstream 71082 26790198 ~ 26791064 (+) True LOC120561052
XM_039804019.1 mRNA downstream 74575 26793691 ~ 26794572 (+) True LOC120561053
XM_039804603.1 mRNA downstream 78707 26797823 ~ 26799241 (+) True LOC120561461
XM_039803534.1 mRNA downstream 110935 26830051 ~ 26837172 (+) True utp15
XM_039803526.1 mRNA downstream 118156 26837272 ~ 26876951 (+) True LOC120560731
TU86927 other upstream 29429 26645020 ~ 26657969 (+) False si:dkey-178e17.1
XR_005639500.1 other upstream 44917 26614237 ~ 26642481 (+) False cltcl1
TU86790 other upstream 191012 26494335 ~ 26496386 (+) False c6h22orf39
TU87117 other downstream 486118 27205234 ~ 27301770 (+) True G65084
TU87830 other downstream 2631008 29350124 ~ 29351753 (+) False ubac1
XR_005639517.1 other downstream 3467732 30186848 ~ 30212108 (+) False fbxo21
TU88038 other downstream 3527771 30246887 ~ 30250240 (+) False LOC120560820
TU88040 other downstream 3528823 30247939 ~ 30250268 (+) False LOC120560820

Expression Profile