RNA id: XM_039802315.1


Basic Information

Item Value
RNA id XM_039802315.1
length 4254
RNA type mRNA
GC content 0.46
exon number 28
gene id morc2
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18470155 ~ 18487380 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATAGAAAAAATATAGGCGGGATTTCTTCAGACCACAGGAAGGGAACCAAGTACGTCGAAGTGGTTGGATTCTTCGCGGCCTGGCGGATTGTTTTATGTTAGGGAAACGGAAACATAACGTTACAAAgaTGAAAGCTCTGGAATAAAGTTTGATTGGAAAGAAAGAAGATAAACAGGAGACCAggaaggaaacagaaaataagTGTGTGGCCATGTCCTACTCCAGCTACAGCAACCTGAGCAGGGCTCAGCTTACCTTTGAGTACCTGCACACAAATTCGACAACCCACGAGTTCTTATTTGGAGCCTTGGCAGAGCTTGTGGACAATTCAAGAGATGCCAATGCCACACGTATAGATATCTACACAGAAAAAAAGCCAGAGCTGCGGGGCGGCTACACGCTCTGTTTTCTGGATGATGGTATTGGAATGGACCCTCaTGAGGCAACTCATGTGATTCAGTTTGGAAAGTCAAACAAACGGTCCCCTGAGTCCACTCAGATCGGCCAGTATGGAAACGGGCTGAAATCCGGCTCTATGCGTATTGGGAAAGACTTCATCTTGTTCACAAAAAAAGGCAACACGCTGACTTGCCTTTTTCTGTCAAGGACTTTCCACGAAGAGGAGGGACTAGATGAGGTGATAGTGCCCCTTCCCTCCTGGGATCTAAAGACTAAGGAGCCGTTGACCTCTGACCCAGAGAAGTACGCCATAGAGACGGAGCTGATCTTCAAGTACTCGCCTTTTAAAAATGAACAGCAGCTGATGGAGCAGTTCAACAAAATAGAAAGTAGCAGTGgcACTCTTGTGATCATCTATAATCTGAAGCTGATGGACAACAGAGAACCAGAACTGGATGTAGAGACAGATCACCAGGACATACTGATGGCTGGGACACCTGTTGAAGGAGTGAAGCCAGAGAAGAGGTCGTTCAGAGCGTACGCCGCTGTTTTGTACATCGACCCACGCATGAGGATCTTTATCCAGGGACATAAAGTCAGGACCAAGAGACTGTCCTGCTGTTTATATAAACCAAGGGTTTATAAATACACATCGACTCGTTTCAAAACTCGTGCTGAGCAAGAAGTGAAGAAAGCAGATCACCTTGCTAAGATTGCGGAAGAAAAAgccagagaggcagagagtAAACAAATGGCTTTGGAGGCCAGATTAGGAGACGACCTTTCCAAAGATTCACGGGCAATTCTGAGAAAGGTTCAAGATTCAGCCATGATGCTTCGACGGGATTGTGACATGAAGAGAAGGATTCTCGAAGCCAAACAGAAAGCATTAAAGGAGCCCAAGGAGTTGAATTTTATATTCGGAGTGAACATTGAACAGAGGGACCTGGATGGGATGTTTGTGTACAACTGTTCTCGTCTCATCAAGATGTACGAGAAAACGGGACCCCAGCTGGAGGGAGGCATgGCCTGTGGAGGTGTGGTTGGAGTAGTTGATGTCCCGTATTTAATTCTAGAGCCTACTCACAACAAACAAGACTTTGCAGATGCTAAGGAGTATCGACATTTACTTAAGTCCATGGGGGAACATTTAGCTCAGTACTGGAAGGACACTAACATTGCTCAGAAAGGCATCGTGAAGTTCTGGGATGAGTTTGGATATCTGTCCGCCAGCTGGTCTGCACCTCCATCATCAGAGCCGAGATACAGGAGACGTCGCGGCATGGAGATACCACTTACTATTCAGTGTGataaatgtttaaaatggaGAACGCTGCCATTCCAGATGGATGCCGTGGACAAACGCTATCCAGACAGTTGGGTGTGTCTCATGAACCCCGACAGCACCCAGGACCGgTGTGATGCTACTGAACAGAAACAGAATTTGCCATGTGGTGTTCTGAAGAAAGACAAGCAGACAGCTGAAGACAAACGGAAAGAGCTGGAAGAGAAAATCAAACAGCAGCAGGAGAAACTAGAGACCTTGCAGaAAACCAGCACTGTAAAATCTGCAGCAGATTTAAAGAAGCTGCCACTGGAAGTCAGCATGAAACCAACAGAGAGCTCCTCTCAGGCAACTAGGTCTTCTGAAAGGTCCATAACACGGCCCCGCTCCCCACCGCTCCCAGCTCACTTAAAAAGCCCCCCTCCATCCCGTGCAGCTTCTCTGCGCCCTACACGAACTCCTGCCCCTCCGCCACCACCACCCAAAGTCGAACCATCAAAGTCCAGAGGTGCAGCAAAGCCTCCTCCACCTGCAGCAAAGCCTGTACCCAAAGCTACTGCCAAAACCCCCCCATCCAGCCGCAGCTCACGGTCACCTGCCAAAGCATCATCAGCCAAACCAGCAGCTGCTGGACAACGGAAGAGAATCGTAGAGCAGGAGGccagtgaggaagaggaggaagaggaggaggaggaagaagaagaagaagaagaagaagaggtggaggaggatgaggacaGTGAGGAAGACAGTGAAGAGGAAGAACCTCAGATAAAGAAATCCAAGATGGCCGCAGCAGCTGGTAACCGTGGGAAAGTGATAGAGAAGGCCTCACCTCCCAAACGTGCTAAGTTGGACGAGGTTAACACCCAGAAGAAAGGAGTTCCTACTCTTATACGGCAGACACCAACGACACCACTCTCTATCCCTAAACCCATTTCCATGCAACAGCATGGGGGTAAAGCAAAGgCACCTGAGAAGCACCAACAGGAGGAACCAGAGATTGACACTAAAAATGCTCAGAAAGATAAGGGTCTGCTGGTTGAAGTACGTGTCAACAAGGAGTGGTACACAGGCAAAGTCATCGCTGTGGAGGCAAATAAAAAGAGTGTTCGCTGGAAAGTGAAGTTTGACTATGTACCTAGATCCACCCCTAAAGACAGATGGGTGTTCAAGGGTAGTGATGATGTCCGGTTGATGCGGCCGCCATCTCCAATCTCTCAGACACCTGACACCCAACAGGAGACCGAGAAGGGCCCTGCACCCATGGAGCCTGACACTACTCAACCAGGAACCAGTCGGGAGGTGACCGATAGTCTCGTCACCATGTTGAGGACAATGCTGCGTTACTTCTTCCCTCCTGCTTTTCGGATCCCAAAGGATGATGTTAACAGCATGACCGCTGAGGAGTTGGTGTCCTTTCCTTTGAAAGAGTATTTCCAGCAGTACGAATCAGGTCTCCAGTCGTTGTGTAACTCGTACCAGAGCAGGGCTGACGCCAGGGCCAAAGCTGTGGAGGAGAAGAGCAACAGCAATGAGGTCAAACTGAAGGAAGCAGACGAGAAACTACAGAAACTACGAACAAACATTGTAGCACTCCTGCAAAAAGTACAAGAGgACATTGACATAAACACAGATGACGAGCTTGACGCCTACATAGAAGACCTCCTTACCAAGGGTGATTAAAGaagacagaaaagagagaggaggatatTCACATAAACAGGCTGGCAGTTTTCATTCAGCTATTACTTGCTGACCACTCCCCCGAGGACTCGTGCTTATGTGCAGAAATGGCCGTTAAATCAGATTGACACAGGTGTGATCTTTGATTTTGATCGTTCCAACGCTTAGTCAGCACAAGTGCACTGTTTTTGTTAGGGCAGGTTTTCTCGTGATCTACATTATTGGGTAGCCTGTGGTTTTCTCTTTAGTCCTTTTTATATACCTGCTCATATATGTTAATCTATGTTTAAGCCATCCTATCCTGATTAATCTTTTGAAATAATTTGTGTAGGTTTAATACATTTATGCTCTCTTTTATATACTGTAGTCGGCTTATGCTGTGACATACTGCAGACTTCATTTGTTCCTCATTTTGGTCCATCGTCGGGTGAGAATTGGACACACCAAGTGACTGGGCTGTGCTCTGTACTTAAacattcacttttatttttgtacaCTAAACATATCAGTGTTGTCCATTACCTTCCCCCATCCTGGTCTAACGAGCAAACAGGTTAATATTTTACGGTTCTGTGGTGTGCCACACCCACAAACAAGAACAACTTACTGGGTTTTATCAGTATGATTATTCCCTTATATCCCTCCACATTTAAGCTACGactgttgtgtttatttttggaagaaaaaaaaattcatttaAATGCAAAAGTTGTGTGTTCATAATTATTCAGTGCCTGTGTACTTCCTTTTCAACAGATTTTTAACATGTCATGGAAATGTTTTATTAATCGGTGCATGCTTTCAGTCTTTTTGTTCCTGGAACAAAGGATTCTGTATTTTTGACAAATCTTTACTTAGAACAATAAAACAGGTTCAGAAACACC

Function

GO:

id name namespace
GO:0005524 ATP binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24135 MORC; MORC family CW-type zinc finger protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83803 lncRNA downstream 72209 18394836 ~ 18397946 (-) True G62586
TU83785 lncRNA downstream 112402 18355242 ~ 18357753 (-) True G62571
TU83782 lncRNA downstream 137759 18331384 ~ 18332396 (-) True G62568
TU83781 lncRNA downstream 140263 18329603 ~ 18329892 (-) True G62567
TU83677 lncRNA downstream 165799 18304157 ~ 18304356 (-) True G62493
TU83856 lncRNA upstream 34184 18521564 ~ 18521875 (-) True G62629
TU83857 lncRNA upstream 47553 18534933 ~ 18535281 (-) True G62630
TU83851 lncRNA upstream 51746 18539126 ~ 18540015 (-) True G62625
TU83955 lncRNA upstream 247528 18734908 ~ 18737388 (-) True mmab
TU83997 lncRNA upstream 259813 18747193 ~ 18748609 (-) True G62733
XM_039802319.1 mRNA downstream 459 18463354 ~ 18469696 (-) False LOC120560133
XM_039802318.1 mRNA downstream 522 18463354 ~ 18469633 (-) False LOC120560133
XM_039802317.1 mRNA downstream 2318 18463203 ~ 18467837 (-) True LOC120560133
XM_039803231.1 mRNA downstream 7826 18455227 ~ 18462329 (-) False slc8b1
XM_039803229.1 mRNA downstream 7826 18455227 ~ 18462329 (-) True slc8b1
XM_039802321.1 mRNA upstream 782 18488162 ~ 18492407 (-) True zgc:158398
XM_039802320.1 mRNA upstream 5362 18492742 ~ 18497861 (-) True plbd2
XM_039802322.1 mRNA upstream 10583 18497963 ~ 18504897 (-) True LOC120560136
XM_039802326.1 mRNA upstream 25129 18512509 ~ 18607135 (-) False LOC120560137
XM_039802333.1 mRNA upstream 49051 18536431 ~ 18558021 (-) True LOC120560142
TU83818 other downstream 27330 18439909 ~ 18442825 (-) False iqcd
TU83799 other downstream 83886 18383005 ~ 18386269 (-) True G62582
TU83796 other downstream 89653 18377602 ~ 18380502 (-) True G62580
XR_005639489.1 other downstream 166293 18298901 ~ 18303862 (-) False fancg
TU83669 other downstream 173477 18293256 ~ 18296678 (-) False LOC120560503
TU83834 other upstream 2492 18489872 ~ 18492390 (-) False zgc:158398
TU83852 other upstream 22775 18510155 ~ 18512261 (-) True G62626
unassigned_transcript_263 other upstream 465520 18952900 ~ 18952972 (-) True trnak-uuu_12
unassigned_transcript_264 other upstream 466110 18953490 ~ 18953562 (-) True trnak-uuu_13
TU84214 other upstream 613861 19101241 ~ 19102450 (-) False ficd

Expression Profile