RNA id: XR_005639472.1


Basic Information

Item Value
RNA id XR_005639472.1
length 1878
RNA type transcript
GC content 0.49
exon number 15
gene id cdc14b
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24823718 ~ 24837448 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AACCTGCCCCTGCTCATAGGCTCATAGACGTCACCGCCACAGTGAGGCTGTAGCAGGCAGATCCTCGGTTGACACATAGGcgatacacaatacacacacacacgcagttcCAGATCATCAGCAGCAGCGCAGGAGCAAGACCATGCCATAATAACGCAGCAAACAAAACTGGGACAAGCCGCTGTACTGCGAAGCGAAGGTCTGTTAGCAGTTGCTCAGGAATGTTCACCGTGCAGCCCTGAAGACAAAATGAAGCGCAAGAGCGAGAGGAGACGAGCCGAGTCGAGGAAAAAGCGCTGTGCAGCTCACTCAGAGGCGGAGTTAAACTCTGATATTTACACTGAGATAACAGTCATGTTCAGAACTGTGGCCAAGATGACCGCGGACGATGTTTCGTCCAGATGTATTGAGTTTATCAAGGATCAACTCTATTTCGCCATACTAAAGCAAAAGATCAAGAACACAGCTGAACGACACTGTTTCTGCATAGATGAAGAGCTGGCATATGAGAActtctATGCGGACTTTGGTCCCCTAAACCTGGCCATGTTTTATCGCTTCTGTTGCAAGCTGACAAAGAAGCTCACGTCCATTACGCTCTCAAGAAAGAAGATCATATTTTACACCTGTGGAGATCAGAAGAAACAAGCCAATGCCGCCTACCTAATCGGCTCGTATGCAgtaATGCATCTAAACATGATGCCAGAGGATGCCTACAGTCTGCTGGTGTCAAGGAATTCAACATATATTCCATTCAGAGATGCTTCGTTTGGAACCTGCATGTACAATCTGAACATCTTAGATTGTCTTCGTGGCGTTCACAAGGCTCTGCAGTACGGCTGGCTCGACTTCTCCAACTTTGATGTGGAAGAATATGAGCACTATGAGAGGGCAGAAAATGGAGACTTAAACTGGATCATTCCAAAAAAGTTCCTTGCGTTCAGTGGGCCTCACCCAAAAAGCAAAATAGAGAATGGGTACCCTTTGCACGCTCCCGAGGCCTACATCCCATACTTCAGGAAACATAACATCACCACTATCATCAGACTCAACAAGAAGATGTACGATGCCAGGCGTTTCACAGAATCTGGCTTTGAGCACCACGATCTGTTCTTTGTAGACGGGAGTACACCAAACGACGCCATAGTCAGGAAGTTCCTCAACATCTGCGAGAACGCAGAAGGAGCCATTGCTGTCCACTGCAAGGcTGGTCTGGGGAGGACTGGCACTCTGATCGGCTGTTACATGATGAAACATTACTGCCTGAGTGCTGCAGAGGCCATTGCCTGGATACGGATCTGCCGACCAGGGTCCATCATTGGGCCTCAGCAGAACTTTGTTGAAGATAAGCAGAACAGTCTGTGGGCAGAGGGAGATGTTTTCCGGGAGAAGATGTTAAATGAACAAGAGAATGGCAAGATGGCTGTAACCAGGATCCTGTCTGGTGTGGATGACATAACCATCAACGGGAGCAACAAGAACAGGGCATCCAAGAAAGAAGAAATGGACCTGTATAATGATGACGAGGAGAGAAATGGCCTTACACAGGGTGATAAACTGCGAGCTCTGAAGAGCAAGAGGCAGGCCAGATCGTCCTCCGGTTCCCTTTCGCAGGTGGTAGTGTTCTGCTGCAGCCTCATGGGCATGGTGTGGCCGATGTGTTGCCTGCCGTTCAAAAGATAGCTGAGAAAGACAGAGTGGgggagaggaaaaacagagagaggatGTGAGGTTTTGTATGATGGAGACAAGAAGAGAATAAGATTCACACCAGGTCTTCATCACAGTCCCTAAGCAGGGTCATATTGCAGGCCAGTGTTCAGGCCAGCGTCAACCCCTTGGCTCTGTCTGACCAATCAGACAGCAGGAAGAGGACTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86075 lncRNA upstream 668 24822491 ~ 24823051 (+) False prxl2c
TU86072 lncRNA upstream 1371 24821314 ~ 24822348 (+) False prxl2c
TU86073 lncRNA upstream 1371 24821314 ~ 24822348 (+) False prxl2c
XR_005639429.1 lncRNA upstream 304846 24514819 ~ 24518873 (+) True LOC120560123
TU86043 lncRNA upstream 460810 24362475 ~ 24362909 (+) True G64251
TU86081 lncRNA downstream 25629 24860249 ~ 24862730 (+) True G64279
TU86090 lncRNA downstream 41942 24876562 ~ 24892517 (+) True G64287
XR_005639412.1 lncRNA downstream 200089 25034709 ~ 25040898 (+) True LOC120560056
TU86234 lncRNA downstream 375304 25209924 ~ 25210170 (+) True G64392
TU86313 lncRNA downstream 425096 25259716 ~ 25302920 (+) True G64450
XM_039804015.1 mRNA upstream 653 24821318 ~ 24823066 (+) True prxl2c
XM_039804577.1 mRNA upstream 608630 24213241 ~ 24215089 (+) True gadd45ga
XM_039802878.1 mRNA upstream 613277 24203522 ~ 24210442 (+) True creb3l3l
XM_039802877.1 mRNA upstream 620735 24181917 ~ 24202984 (+) True nim1ka
XM_039802672.1 mRNA downstream 9086 24843706 ~ 24849355 (+) True znf367
XM_039803214.1 mRNA downstream 60442 24895062 ~ 24901099 (+) True smyd1b
XM_039803215.1 mRNA downstream 60442 24895062 ~ 24900970 (+) False smyd1b
XM_039804602.1 mRNA downstream 89909 24924529 ~ 24932594 (+) False znf366
XM_039804601.1 mRNA downstream 89910 24924530 ~ 24932594 (+) True znf366
TU85875 other upstream 1130428 23692662 ~ 23693291 (+) True G64108
TU85622 other upstream 1893514 22929899 ~ 22930205 (+) True G63905
XR_005639510.1 other upstream 3224920 21588876 ~ 21598799 (+) False LOC120560787
TU85087 other upstream 4145803 20676417 ~ 20677916 (+) True G63480
XR_005639483.1 other upstream 4334881 20477812 ~ 20488838 (+) False wdr31
TU86491 other downstream 850352 25684972 ~ 25696570 (+) False LOC120561182
TU86550 other downstream 1079762 25914382 ~ 25915529 (+) False LOC120560031
TU86770 other downstream 1578249 26412869 ~ 26414597 (+) True G64814
TU86790 other downstream 1659715 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other downstream 1659715 26494335 ~ 26496328 (+) False c6h22orf39

Expression Profile