Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039802742.1 |
| length | 1019 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | vamp5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 8274921 ~ 8281269 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80652 | lncRNA | downstream | 73178 | 8201493 ~ 8201743 (-) | True | G60073 |
| TU80651 | lncRNA | downstream | 73546 | 8201036 ~ 8201375 (-) | True | G60072 |
| TU80643 | lncRNA | downstream | 104315 | 8170385 ~ 8170606 (-) | True | G60064 |
| TU80536 | lncRNA | downstream | 371009 | 7903693 ~ 7903912 (-) | True | G59972 |
| TU80534 | lncRNA | downstream | 372382 | 7902231 ~ 7902539 (-) | True | G59970 |
| TU80730 | lncRNA | upstream | 17915 | 8299177 ~ 8301619 (-) | True | G60133 |
| XR_005639527.1 | lncRNA | upstream | 81498 | 8362760 ~ 8369854 (-) | True | LOC120560869 |
| TU80738 | lncRNA | upstream | 91004 | 8372266 ~ 8386564 (-) | True | G60140 |
| TU80746 | lncRNA | upstream | 129641 | 8410903 ~ 8411138 (-) | True | G60146 |
| TU80763 | lncRNA | upstream | 155113 | 8436375 ~ 8436659 (-) | True | G60161 |
| XM_039802741.1 | mRNA | downstream | 2618 | 8235559 ~ 8272303 (-) | True | gcn1 |
| XM_039803060.1 | mRNA | downstream | 39912 | 8216297 ~ 8235009 (-) | False | rab35b |
| XM_039803059.1 | mRNA | downstream | 39925 | 8213946 ~ 8234996 (-) | True | rab35b |
| XM_039803950.1 | mRNA | downstream | 113664 | 8089036 ~ 8161257 (-) | False | LOC120561008 |
| XM_039804128.1 | mRNA | upstream | 23160 | 8304422 ~ 8321883 (-) | True | vamp8 |
| XM_039803744.1 | mRNA | upstream | 43802 | 8325064 ~ 8346266 (-) | True | ncaph |
| XM_039804237.1 | mRNA | upstream | 362141 | 8643403 ~ 8727443 (-) | True | tacr1a |
| XM_039802729.1 | mRNA | upstream | 631783 | 8913045 ~ 8921405 (-) | True | ogfod2 |
| XM_039803666.1 | mRNA | upstream | 777852 | 9059114 ~ 9098096 (-) | False | adam28 |
| TU80531 | other | downstream | 387518 | 7879424 ~ 7887403 (-) | False | anapc7 |
| TU80421 | other | downstream | 690402 | 7584086 ~ 7584519 (-) | True | G59881 |
| unassigned_transcript_243 | other | downstream | 763630 | 7511221 ~ 7511291 (-) | True | trnag-ccc |
| TU80230 | other | downstream | 1278065 | 6991203 ~ 6996856 (-) | True | G59739 |
| TU80011 | other | downstream | 1751247 | 6522759 ~ 6523674 (-) | True | G59563 |
| TU80745 | other | upstream | 119760 | 8401022 ~ 8402566 (-) | True | G60145 |
| TU81433 | other | upstream | 2907880 | 11189142 ~ 11189741 (-) | True | G60715 |
| TU82089 | other | upstream | 5307777 | 13589039 ~ 13589332 (-) | True | G61264 |
| unassigned_transcript_252 | other | upstream | 6657713 | 14938975 ~ 14939047 (-) | True | trnaa-agc_14 |
| unassigned_transcript_253 | other | upstream | 6663234 | 14944496 ~ 14944568 (-) | True | trnaa-agc_15 |
