RNA id: TCONS_00074566


Basic Information

Item Value
RNA id TCONS_00074566
length 780
RNA type mRNA
GC content 0.39
exon number 6
gene id XLOC_038003
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34836068 ~ 34842414 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCTAGTGCTGGTCCAGACGATTATGATGAGGAAGAACCCATAGAAGACATCGACCCGGACAGGATTGTATTTAATATTAGTAAAACACCATATGGTGTTAAAGTAATATGGAGAGTTGCAAATAATAATGCGGACCCTCAGTGTTTTAACACAGAAGTGCAGTACAAGCGCCAATGTGAGAAAGACTGGGAGAGAAGTCACAGGATCAAACTTCAAAATAATCAAGAGGAGAATCATTTAAACTTGTCTACTTTAAGCACGAAGATGAATTATGATTTCAGAATAAGAATGAAGTATGAGTGTTTGGAAAAGGACTGGAGCAACTGGACAAAAGTACAAAGTTGGGGAAACAATAAAGATGTCTGTATGGTGAAATCATCTTACTACATATGGGTTTACATTTTGATAATCATGCTGCCACTGATTACCTTTCTTCTCTTTTGTCTGCTGATTCAACAAAGAATTAGAAAACTGCTTCTTCCTGAAGTACCAGATCCCAAAcacttaaaacataaaatcatGGACACTGAGCAGTTTCAGTGGTGGGGAAACCTTACGCAGAGGAATGAAGATTGCCCAACCACAGACGTTGAGATTATTGACAAAAGTGAAAGCGAAGAGGTTCATCAAACTTTGGTAACACAACCCACAGACACCATCCCCGAGCAACATGACAGCATGTACTACATTTACTCCTCTGAAACGCTTGGTGAAAACACAGATCTGCAATACTCGAAGAGTGTGTTAGGGTACATCGCTCTTGAGGACTACAACAAATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000126348

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074563 lncRNA downstream 23185 34701942 ~ 34812883 (-) False XLOC_038001
TCONS_00074565 lncRNA downstream 23185 34773621 ~ 34812883 (-) True XLOC_038001
TCONS_00075414 lncRNA downstream 23186 34592026 ~ 34812882 (-) False XLOC_038001
TCONS_00075416 lncRNA downstream 23186 34628721 ~ 34812882 (-) False XLOC_038001
TCONS_00075417 lncRNA downstream 23186 34712779 ~ 34812882 (-) False XLOC_038001
TCONS_00074570 lncRNA upstream 32489 34874903 ~ 34877372 (-) True XLOC_038006
TCONS_00074574 lncRNA upstream 66521 34908935 ~ 34915388 (-) True XLOC_038008
TCONS_00075419 lncRNA upstream 311641 35154055 ~ 35160615 (-) False XLOC_038013
TCONS_00075004 lncRNA upstream 312416 35154830 ~ 35161005 (-) True XLOC_038013
TCONS_00074592 lncRNA upstream 789879 35632293 ~ 35633657 (-) True XLOC_038015
TCONS_00074560 mRNA downstream 326071 34485048 ~ 34509997 (-) False XLOC_037999
TCONS_00074559 mRNA downstream 328388 34484454 ~ 34507680 (-) False XLOC_037999
TCONS_00074561 mRNA downstream 335871 34488163 ~ 34500197 (-) False XLOC_037999
TCONS_00074558 mRNA downstream 439804 34389976 ~ 34396264 (-) True XLOC_037998
TCONS_00074557 mRNA downstream 467226 34356895 ~ 34368842 (-) True XLOC_037997
TCONS_00074568 mRNA upstream 24162 34866576 ~ 34871900 (-) True XLOC_038005
TCONS_00074569 mRNA upstream 30319 34872733 ~ 34882516 (-) False XLOC_038006
TCONS_00074571 mRNA upstream 42519 34884933 ~ 34885902 (-) True XLOC_038007
TCONS_00074572 mRNA upstream 60557 34902971 ~ 34915394 (-) False XLOC_038008
TCONS_00074573 mRNA upstream 60852 34903266 ~ 34915351 (-) False XLOC_038008
TCONS_00074564 other downstream 82909 34753044 ~ 34753159 (-) True XLOC_038002
TCONS_00074544 other downstream 914497 33921464 ~ 33921571 (-) False XLOC_037985
TCONS_00074543 other downstream 915044 33920932 ~ 33921024 (-) True XLOC_037984
TCONS_00074537 other downstream 1051561 33783555 ~ 33784507 (-) False XLOC_037982
TCONS_00074530 other downstream 1396503 33438962 ~ 33439565 (-) True XLOC_037978
TCONS_00074567 other upstream 6446 34848860 ~ 34851804 (-) True XLOC_038004
TCONS_00074593 other upstream 859241 35701655 ~ 35701772 (-) True XLOC_038017
TCONS_00074595 other upstream 1276546 36118960 ~ 36120526 (-) True XLOC_038020
TCONS_00074596 other upstream 1918475 36760889 ~ 36761294 (-) True XLOC_038023
TCONS_00074597 other upstream 1923209 36765623 ~ 36766028 (-) True XLOC_038024

Expression Profile

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