RNA id: XM_039802774.1


Basic Information

Item Value
RNA id XM_039802774.1
length 2009
RNA type mRNA
GC content 0.46
exon number 4
gene id dusp2
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25949454 ~ 25952579 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAACAGACCTGACGGAGAATTCAACACGTGCTCtctaaatatatttacagtagaTTTTAAAATCATCTCCAAAAGTTCTTTATTATCTTAAAATTCGCACAGAAAAACACTTAACACggatttatctttttattttttgagagCCTATTTTAGTTGTTAAAAACAAATAGGTCTTGCTTATTATTTATTAGTTTTAACTTGTTTTAAATAGACTTTTTTTCAGCCATGACTTCAAGCAGTGAGCCTTTGGAAATAAGTGGCAATGAGCTGGTTCACATACTCAGGACCCCCCGGGAACAGTACACCTCTGCTGGCTGTGTGGTGCTCGACTGCAGACCTTTCCTCGATTTTTCTTTAACGCACATTTGCGAGTCCCGAAACGTCAACTGGAACTCAATGCTGCGTCGTAGATCCAAGAGCTCGGTGGTGGCTCTGGAGTGGCTCATCCCGGACAAGGCGCTGCTGGGCCGGCTGCGCCGCGGGGAGTTCTCcccggtggtggtggtggtggatgaGAGCAGCCGCTCCGTGGCCGAGCTGAAGGCAGAGAGCGTGGCCCAGATGCTGCTCACCGCCCTGCAAAACGAAGTTCAGACGCAGATCTGCTTTCTGCAAGGTGGATTTGAGGGATTTTCAGAGGCCTATCCAGAGTTCTGTTACAGCTCAGCCAGCAATCCCCTCTATGCAGTGGAACCAGAGCAAACAGTGACAGGTCGGAGGACCCCAGCATATGATCAGGGTggtccagtggagctgctgcccTTCCTGTTTTTGGGCAGTGCCATCCACTCCTCACGCAGAGAGACCCTCGCAGCTGCGGGCATCACAGCTGTGCTCAACGTTTCCTCCACATGCCCTAACTTCTATGAGGGGGAGTTTCAGTACCTGCGGCTCACTGTGGAGGACAGCCTAGCTGCTGACATCAGAGCCTGCTTCTCCACAGCCATTGCCTTCATCGACTCGGTGAAGCAGAGTGGTGGTCGGGTGCTGGTGCATTGCCAGGCGGGTATCTCCCGCTCTGCCACCATATGTCTGGCCTACCTCATGCACACGCAGCGTGTCAAGCTGGATGAGGCCTTTGACTTTGTGAAGCAGCGGCGTCAGGTCATCTCCCCCAACCTGGCCTTCATGGGACAGCTGCTGCAGTTTGAGACTGATGTGCTCTGCCATGGATGAAGACCACAGGTCGCATTCTTTTCAATTCATTCTCCTGCCTCTTGCAGGCGTTGACTTTATCAGCCGTTATCAGCACTTGTATGTACTGTTTGTACTATTGAAACTAGTATATTTCAGAAGTATATGCTTTGTACATTCAGAGAAAAGCTAATTGTGCTGCTGGCATCACATGGCCAGTGGATCTGAACTCCTACTTTTTAGGAGAAACTGACAAACGGCATTTAGCAATATAAACTTGTTATGAACAATTGTGATTCTGAGCCAGCAAGTTGGAGCAGCTATGAGGTaatttccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttgtttaacttATGTGCCTGATCTTTTGCAAGGACTGTCTTATATTTCTTCACATTTACGACCACTGTGACATGACAGATCTTTTTATGAGACAACACTGTGTTAACTACTTAAGGCAATACTGGATGAATCTCAAGTTGTATTGTctactttataaaaaaaaatgcactaaCCACTGTTTGTGTCATTGCATTCTGTTTCCTGAGATGGATTACACTTGGTAAACTCAAGCtggaagatgttttttttttattttttttattatgtatgtaatagaatttttgtttttatttatttcaacagtTGTTATGACAGTGTAGCATTATTACTGTCCATTACTGCACTTTAAAGTTTGGCTGATTCCTGCTGTTTTTTccactaaaataaaaacatgctgGAGAACACA

Function

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86587 lncRNA upstream 20296 25928924 ~ 25929158 (+) True G64677
TU86549 lncRNA upstream 20862 25926087 ~ 25928592 (+) False LOC120560359
TU86572 lncRNA upstream 27066 25922163 ~ 25922388 (+) True G64663
TU86567 lncRNA upstream 31361 25917765 ~ 25918093 (+) True G64658
TU86566 lncRNA upstream 31978 25917187 ~ 25917476 (+) True G64657
TU86705 lncRNA downstream 351271 26303850 ~ 26321956 (+) True G64764
TU86725 lncRNA downstream 419055 26371634 ~ 26383843 (+) False nsd3
TU86797 lncRNA downstream 541756 26494335 ~ 26496987 (+) True c6h22orf39
TU86807 lncRNA downstream 559886 26512465 ~ 26514759 (+) True G64834
TU86810 lncRNA downstream 579173 26531752 ~ 26533420 (+) True G64836
XM_039802766.1 mRNA upstream 117 25939776 ~ 25949337 (+) False LOC120560362
XM_039802763.1 mRNA upstream 117 25939864 ~ 25949337 (+) False LOC120560362
XM_039802770.1 mRNA upstream 117 25939864 ~ 25949337 (+) False LOC120560362
XM_039802769.1 mRNA upstream 117 25939864 ~ 25949337 (+) False LOC120560362
XM_039802771.1 mRNA upstream 117 25939864 ~ 25949337 (+) False LOC120560362
XM_039802761.1 mRNA downstream 6220 25958799 ~ 25964487 (+) True adra2b
XM_039802762.1 mRNA downstream 6220 25958799 ~ 25964487 (+) False adra2b
XM_039802632.1 mRNA downstream 28329 25980908 ~ 26161608 (+) False gpat2
XM_039802631.1 mRNA downstream 28330 25980909 ~ 26161608 (+) True gpat2
XM_039802633.1 mRNA downstream 221645 26174224 ~ 26180116 (+) True zgc:152830
TU86550 other upstream 33925 25914382 ~ 25915529 (+) False LOC120560031
TU86491 other upstream 252884 25684972 ~ 25696570 (+) False LOC120561182
XR_005639471.1 other upstream 1114823 24823718 ~ 24834631 (+) False cdc14b
XR_005639472.1 other upstream 1114834 24823719 ~ 24834620 (+) False cdc14b
TU85875 other upstream 2256163 23692662 ~ 23693291 (+) True G64108
TU86770 other downstream 460290 26412869 ~ 26414597 (+) True G64814
TU86790 other downstream 541756 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other downstream 541756 26494335 ~ 26496328 (+) False c6h22orf39
TU86793 other downstream 541756 26494335 ~ 26496261 (+) False c6h22orf39
XR_005639500.1 other downstream 661658 26614237 ~ 26642481 (+) False cltcl1

Expression Profile