RNA id: XM_039802810.1


Basic Information

Item Value
RNA id XM_039802810.1
length 4217
RNA type mRNA
GC content 0.52
exon number 28
gene id fkbp15b
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12752510 ~ 12794431 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGAAGCCTTTTGTCACAGCCCATCGCTGCTCAGCATTAACTCGAAGCTCTTCAGTTTCTTCCTCTACTATGCTGTTGAATCTACCATGGTGGTGTGACTGAACCGAAGAATGAAAGATCAGGGGTAGCCTGGGAAAGAAGCGTTGGAAGGTACACTTGTAGGAGTTTGActcacacatgcaaacagacTGCCCCTTCTCATCCCAGTTCCTTGCCATCGGAGATGAGGGCCTCAAGGCTTTCAACATGTCTGTTCTGGGAGATACCAATGAATACCAGTGGAAGGAGTTCCAGGGGGCCAAGTTGGCCTCCCTGTTTGGACTAGACCAGGAAGGCAGTCAGGGCAACGAGTCCTTCCAGTACACAGCACCGAAACAGCCTAGAAAGAGCCCCAATTCAGCGCCGGCCACCCAGAAACCAGCTCCACCACCTGGAGCTCCTGCAGTGTTATTCGCCACAGCAGTCCAAGCCTTCAGATATATTAACGGACAGTATGCAAAGCAGGGAAAGCTGGGAGCAGCCGTGCTGGGCAACCACACAACAAAAGAGTACAAGCTGCTTCTGTACTTGAGCCAACAGAAGCAAGTGACCGCTGCCAAGATTCATATGGGCTTTGTTTTCACGGTACAGCCGAACAATTACTTCACTTTTTATGATGAGCAGCGGCAGAACTGGTCCCTGATGTTTGAATCGGATAAAGCTGCATCAGATTTTTGTAAAGAGGTGTGTTTGGCGAAAGCGAACAGCGCAGTCTCCCTAGATGCTGTGGTGGTTCAGGATCTGAGTCTTGGTGAGGGCCAGGCGGTGGAGAATGGAGACTCTTTGGAGGTGGTGTACACAGGCTGGCTCCTGCAGAACCACGCCATCGGACAGATGTTTGACTCCAACCAGAACAAAGACAAGTTGCTGCGACTGAAAATTGGAGCTGGAAAAGTGATCAAAGGCTGGGAGGAAGGGATGCTTGGGATGAAGAAGGCGGGCCGTCGTCTCATTGTCATCCCACCCAACCAGGCTTACGGATCCAAGGGCGTCCCCAACCGTGTCCCGGCTAACAGCACTCTTATTTTCGAAGCAGAGCTTCGACGGGTGAAGTTTTCCAAGGACAATGGGTCTGTTAGTACCAGTACCAGCTCCAGAGGCTCTGCTGCTCCCTCCCCTATTCCCTCCCCAGCCCCCAGTGTGGAGAGTCTGGCCTCAGATCCTCCGGTACAGCTGGCCGCCTCCAGTCCAGGCAGACCAGGggAGCCACCACTTCGTGCAAAGTCAAACTCCCTCAGTGAACAGTTGGCAAATCCAGACGCCACTAAAGCCAAGTTGATCTCTCGCATGGCGAAGATGGGCCAGCCCATGTTGCCCTTCCTGACAGGAGGCGCCAGCCAGCCTGAATCCAGTGATTCTGAGCTCGAGGACACTAGTGGCAACAGAGCGAAGGATCGGCCTGCGGCTCCATCTCCAGTGCAGATCTCCACTGCTGCTCCAGCTTCAGCACACGTTTATCCTCATCCTCACACTGCTCCACCCTCTGCCTTACTTCCTATTACGCCCACTGTTCCCCCACAGCCTGGGCTGTCGGGCAGCAGCCATGCCTTTCAGCCTTACTCCTACACACAGACCTCTGTGGCTCCGTCTCAGCTGCAGCCTGTTGGCCAGGTCTACCCTGCGCAAACTGTCCCATACATGGGCTCAAGTGATGTGACTTCCTTCTTGATGACTGAGGCCCgacaacacaacacagagatCCGGTTATCTGTCGGAAAAGTAGCAGATAAAGTGGATCAACTAGCCTCGAAGATAGATGACCTCCAGAGGCAGGGAAGTCTTTCTACGGCTGTTCCTAGTATGTCAATGGAAACCTCCATGATCATGCACAACATCCAAAGAATTATCCAGGAaaatgaatgtttaaaaaaggaagtcttTGAGAAAAGCTCTCGCATTGAGGAGCAAAACCGCAAGATCGGGGGGCTCATCAACCAGAACCAGAGTTACATGGAGCAGAGTAACCTGCTGCTGGAACAGAGGAACGACTCCCTCAAGTCTTCCAGTGAACAGATCCAGGCCAGATTACTGCATGCTGAGCAGGACAAGGTTCGTCTGACGGAGGATCTGACCACGGCCACGGCCCAGCTGTCTCAGCTGCAGCTAGAAGCCACAGCTCACCAGCAGAAGGCCATGGAGCTGCAGGGTAAACTGGGCTCATCGCTGCAGGACAGTGAGAGGCACTGCCAACGCATCGCTGCCCTGGAAACACAGATGGAAGAGCTGAAGCAAGCAGCAGAGACGGCGCAGGCTCAGTACCGCTCAGAGAAGCAAAGACGCAAAGAAATGGAGCTGAGAGTCaacaacatggaggaggaaCTGCAGGACCTAAAAACTGATAAAGAGAGCCTAGAACGAACACTTTTGGAAAGGAGGAAGAAGTGGCAGGCGGAGCGTCAGCGTCGGgatgaggaggtggaggagctcCGTAAGAGCAGCCAGCAGGAGCTGGACAACCTCCGAGCTCAACTCCGCAAGGCCAGGACCAGCACTGACAACGCAGCATCGGAACAGTTGTCTCAGCTGCAGgcggagctggaggaggagtggAAGGGGAAGTGTGAGCAGATGTTGGCCTCTGCTAAAGAGCAGCACAGTAGAGAGCTGGCTGAACTTACAGAGCAGAGAGATGCTCTGCAGGACAAGCATACCCAGCTACAGGAAAAGTTTATGGTTCTGAAGCAGTCAAGAGATGTAGAAGAGCAGACTTTGCTACAACATAGCGGGCAGACTGAGGAGCTGCAAGGCCTTCAGGAAAAATACACAGCCTTGGAGCAGCAAGGAATAGCTGTAAGGGAAAAACTGGAAAGAAAAGTGGCTGACCTGGAGAAGAAACTGGCAGAGCAGGAAAGTTCAGGAGATACTTCAGCAGAGGTGAAGCGTGTGATGAACGGAGTGTTTCATTCCCTGCGAGGGGAGTTTGACCTTGGTGAATCGTACAGTGGCCAGGCTGTGCTAGGGGTGATTGTCACTACCATTAAGAACGTAACCCTGCAGCTGCTCAGTGGCACAGACAGATCTCCGCCGAGACCGGtaaagaaggaagaggaggaagaagaggaagaagaaagtgAGGATGTGATGCAAAGACAGGAGTCTGTGCAGAATGTACATGTGAACGGTGAGCGAGGAGTCAAAGAGCaagaaaaggaggaagaagaacaTGAGGCTGAATCGGATTCCCACCAAGTCAGTGAGACCCAGGTGGATCGGGAAGTAGCAGCAGAGAAGGAGACGGAGACAGTAACTGAGTCAAACGCACAAAGCCCGCCAGAGGCTGCCGATCTCCATCCCGATTCTCCAACTGAGCCCAAACTGCAAGAGACAGCAGAGCCTGAAGTACAGCAGGAGCAGGCAGGACACCAACAAAACGAAAAGGACACCAACAAACCTGCAGATCCAGGGGATGAACCTGATCAGAGCTCACCACCTGAGGATGGACAGGAAACGGTTTCAGAAAGAAATGCTGCAGTGAGCAGTGAGGAGGACAAGGAGAGCGTGGACGATGGAGAGCATGTAGAAGAAATGCACGCTGCTTCTCTGAAAGCCTTTGGACCCCCAGCCAACCCTCCTCCGCCACCGAGTGCACTACCGAACAGCTCAGGAGAGGACACAAGAGCTTGAAGGGGCGTCCCCCACCTGCCCCTCTCTTtggtgatgatgaggaggaTAATGATCTGGACTGGCTAAACTGAGATGGAACCAGAATAATACAAGTCTGCGTCTTCATTTTCAACATTAAAGACAGGCGGGAGTTGCTTTACCCAGCCGTCTCTGCCCGGTGGAGCAGCCAAGATGACGAGAGAGGCCTCTGCTGATGAACTTGATTGGATGGAGAAGTCCGACAGCCTGCTCTTCACCTCCGTGCTGTCCTGGTGACTGACAGCTGCTGCCACAGCTACAATTTCTGGCTCtgatttttgtttgaaataACCAGCCTGTAATTCATAGAAGAATCAAAACAAATACTTTTCATTAATGATGTGATATCTGTTGGTGATGTAAATTAATCCCAAATTTTTACGTGGCAATGTAGCAAATTAGTTTGTTGGATCAGCAGTAATCCTGTTGTTTTAATCATTAGGTTGCTGCTATGAGAGTAGAACTTTTACACAATTTTGTTAAACTGAAATTAATTCCAGAAAATAAATGACATGGAAAATGTCCTTTATCACTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81877 lncRNA upstream 72631 12679709 ~ 12682068 (+) True G61091
TU81853 lncRNA upstream 115839 12638608 ~ 12638860 (+) True G61067
TU81834 lncRNA upstream 145241 12609104 ~ 12609458 (+) True G61053
TU81833 lncRNA upstream 146642 12607644 ~ 12608057 (+) True G61052
TU81831 lncRNA upstream 150489 12603756 ~ 12604210 (+) True G61050
TU81962 lncRNA downstream 205028 12999459 ~ 12999887 (+) True G61160
TU81973 lncRNA downstream 376362 13170793 ~ 13180491 (+) False LOC120560904
TU82004 lncRNA downstream 387151 13181582 ~ 13182257 (+) False G61192
TU82005 lncRNA downstream 387151 13181582 ~ 13182308 (+) True G61192
TU82008 lncRNA downstream 388188 13182619 ~ 13184450 (+) True G61194
XM_039803770.1 mRNA upstream 6163 12740866 ~ 12748536 (+) True fgf17
XM_039803771.1 mRNA upstream 6163 12740866 ~ 12748536 (+) False fgf17
XM_039804008.1 mRNA upstream 253149 12474081 ~ 12501550 (+) True LOC120561040
XM_039804006.1 mRNA upstream 268933 12474173 ~ 12485766 (+) True LOC120561039
XM_039802658.1 mRNA upstream 596001 12121425 ~ 12158698 (+) True dpp7
XM_039802811.1 mRNA downstream 36841 12831272 ~ 12837907 (+) True ccn1l2
XM_039802813.1 mRNA downstream 36841 12831272 ~ 12837907 (+) False ccn1l2
XM_039802812.1 mRNA downstream 37085 12831516 ~ 12837907 (+) False ccn1l2
XM_039804579.1 mRNA downstream 66159 12860590 ~ 12865252 (+) True si:dkey-90l8.3
XM_039803769.1 mRNA downstream 115383 12909814 ~ 12932999 (+) False bcl2l16
TU81647 other upstream 828098 11926183 ~ 11926601 (+) True G60897
XR_005639564.1 other upstream 2002259 10748116 ~ 10752440 (+) True LOC120561144
XR_005639563.1 other upstream 2002259 10748116 ~ 10752440 (+) False LOC120561144
XR_005639565.1 other upstream 2002259 10748116 ~ 10752440 (+) False LOC120561144
XR_005639562.1 other upstream 2007751 10726446 ~ 10746948 (+) False LOC120561142
TU81938 other downstream 126716 12921147 ~ 12923836 (+) False G61139
TU81939 other downstream 126716 12921147 ~ 12923836 (+) True G61139
TU82171 other downstream 1313052 14107483 ~ 14109546 (+) True G61337
TU82172 other downstream 1347011 14141442 ~ 14142050 (+) True G61338
TU82219 other downstream 1488986 14283417 ~ 14283871 (+) True G61383

Expression Profile