RNA id: TCONS_00074583


Basic Information

Item Value
RNA id TCONS_00074583
length 1506
RNA type mRNA
GC content 0.43
exon number 7
gene id XLOC_038012
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34978867 ~ 34986827 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGAAAGGAACACACTACAGACCTACAAGATCAGCACTGAAGGAACTCTGGATATTTTTTTCAAGATGAGGAAAATACTCTCGCTGGTTATCATCTTATCAGCAACAGTACATCTCACAGAAGCAGAAGAAGCTCCTCTGAAGCAGGATGAAGGTTTGCTGGAGCCTGATTCAGTCTTGCTGGAGCCTGAAACAACAGAggagcacaaacacacagaagagGCATCAGTGCTGTTGGAAGAACCAGAGCTAAATGCAGATTATCTGACTGAAGAAGCACCAGAGACAGAACTACAGGCAGAAACACTGCTGAACACTAACCTCGAACCTGTGGAGGAGCCTGTGAATGAACTTGTGGAGGAGCCCGTGGAGGAGCCTGTGGAGGAACCTGTGGAGGAACTGGTAGAGGAGCCTGTGGAGGAGCTTGTGGAGGAGCTTGTGGATGAACCTGTGGAGGAGCCTGTAGTGGAGCCTGTGGAGGAATCTGTGGAGAAGCCTGTGGTGGAGCCTGTGGTGGAGCCTGTGGAGGAACCTGTGGAATTCCAGTCTGAGGAGCCCACACTTCAAGCAGACTATATAGTGGTTGAAGAATCAGAAGTAGACATGAATCCTGGCAGAAAACAGCGAATGGCGTTACAAAAAGGTAGGCGCCGTTGTAGAGGATTCACCGTGCAGCACACATGTTACGAGTTCTTCACAAGAAAGCTCAATGCCAGTGATGCTGAGTTACAATGCCAAAAAGGCTGTCCTAATGGTCACCTGGCTTCCGTGACAAGCAGCTTTATTCGTGCTGAAATCTATAATCTAATGGACCGGTACAGCAGCCGCTCTGACACATGGCTTGGAGGAAGGAGAATCATTGGTACAAATACTTTTACATGGTTGGATGGAGAGCCGTGGACCTACAATGGCTTTTTTTCTGGAGAACCAAATAATCTGGGTGGAAATGAGGATTGCATTGAGATACTATATCGAGTGGGGTTCAATGACGTAGCGTGCTTTCTAACAAGACCGTTCGTCTGTTCCTGTCCAGTTTAGACAGCAAGAAGATTCACCTATcaaagtgtttctcaaccacattcctatgagaccaccagctctgcacatttccgtgtctccttaaccaaacacacctgattcagatcatcaactCATTAGCAAAGACCTAaacacctgtaatgggtgtgaccgACAAAAGAGACATCAAAAACATGTAGTGTTGGTAGTCCTcaagaaacgtggttgagaaacactgacctaACCCACTACACAGATACTTTTGTAAAGTGCAAAGTGTAACCATGGGTGAAATGCattgaatgtattaaaattaatattttataatacttcataagttattaaaactgattttattaaatttgccatggtttacattaaaaacaataatgaaaacatacattttatgAACAACAACTGATACATTAATCAGGTTAATACAGCATTGTATTGTTTTAAGTGTTTTTCTACTTAATAAAACCATCCTGTAC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-142 No description available

Ensembl:

ensembl_id ENSDART00000137862

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074574 lncRNA downstream 63479 34908935 ~ 34915388 (-) True XLOC_038008
TCONS_00074570 lncRNA downstream 101495 34874903 ~ 34877372 (-) True XLOC_038006
TCONS_00074565 lncRNA downstream 165984 34773621 ~ 34812883 (-) True XLOC_038001
TCONS_00075417 lncRNA downstream 165985 34712779 ~ 34812882 (-) False XLOC_038001
TCONS_00075419 lncRNA upstream 167228 35154055 ~ 35160615 (-) False XLOC_038013
TCONS_00075004 lncRNA upstream 168003 35154830 ~ 35161005 (-) True XLOC_038013
TCONS_00074592 lncRNA upstream 645466 35632293 ~ 35633657 (-) True XLOC_038015
TCONS_00075420 lncRNA upstream 694141 35680968 ~ 35832754 (-) True XLOC_038016
TCONS_00075005 lncRNA upstream 1003837 35990664 ~ 35995392 (-) True XLOC_038019
TCONS_00074581 mRNA downstream 4451 34970418 ~ 34974416 (-) False XLOC_038011
TCONS_00074582 mRNA downstream 4724 34970420 ~ 34974143 (-) True XLOC_038011
TCONS_00074577 mRNA downstream 33285 34938316 ~ 34945582 (-) False XLOC_038010
TCONS_00074579 mRNA downstream 33301 34939323 ~ 34945566 (-) False XLOC_038010
TCONS_00074580 mRNA downstream 34212 34939339 ~ 34944655 (-) True XLOC_038010
TCONS_00074584 mRNA upstream 39588 35026415 ~ 35069777 (-) False XLOC_038013
TCONS_00074587 mRNA upstream 41470 35028297 ~ 35069645 (-) False XLOC_038013
TCONS_00074586 mRNA upstream 41470 35028297 ~ 35069645 (-) False XLOC_038013
TCONS_00074585 mRNA upstream 41470 35028297 ~ 35069645 (-) False XLOC_038013
TCONS_00074588 mRNA upstream 41470 35028297 ~ 35155089 (-) False XLOC_038013
TCONS_00074567 other downstream 127063 34848860 ~ 34851804 (-) True XLOC_038004
TCONS_00074564 other downstream 225708 34753044 ~ 34753159 (-) True XLOC_038002
TCONS_00074544 other downstream 1057296 33921464 ~ 33921571 (-) False XLOC_037985
TCONS_00074543 other downstream 1057843 33920932 ~ 33921024 (-) True XLOC_037984
TCONS_00074537 other downstream 1194360 33783555 ~ 33784507 (-) False XLOC_037982
TCONS_00074593 other upstream 714828 35701655 ~ 35701772 (-) True XLOC_038017
TCONS_00074595 other upstream 1132133 36118960 ~ 36120526 (-) True XLOC_038020
TCONS_00074596 other upstream 1774062 36760889 ~ 36761294 (-) True XLOC_038023
TCONS_00074597 other upstream 1778796 36765623 ~ 36766028 (-) True XLOC_038024
TCONS_00074598 other upstream 1783530 36770357 ~ 36770663 (-) True XLOC_038025

Expression Profile

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