Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039803246.1 |
| length | 1391 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | elac1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 22884588 ~ 22891019 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0042779 | tRNA 3'-trailer cleavage | biological_process |
| GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | biological_process |
| GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | molecular_function |
| id | description |
|---|---|
| K00784 | rnz; ribonuclease Z |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85491 | lncRNA | upstream | 734464 | 22131884 ~ 22150124 (+) | True | G63792 |
| TU85374 | lncRNA | upstream | 1008901 | 21875445 ~ 21875687 (+) | True | G63715 |
| TU85373 | lncRNA | upstream | 1039450 | 21844832 ~ 21845138 (+) | True | G63714 |
| XR_005639467.1 | lncRNA | upstream | 1263877 | 21608823 ~ 21620711 (+) | True | LOC120560273 |
| TU85584 | lncRNA | downstream | 13016 | 22904035 ~ 22905966 (+) | True | G63872 |
| TU85631 | lncRNA | downstream | 96162 | 22987181 ~ 22988040 (+) | True | G63914 |
| XR_005639470.1 | lncRNA | downstream | 328831 | 23219850 ~ 23245368 (+) | True | LOC120560300 |
| TU85721 | lncRNA | downstream | 383901 | 23274920 ~ 23281109 (+) | True | G63976 |
| TU85782 | lncRNA | downstream | 539671 | 23430690 ~ 23432473 (+) | True | G64026 |
| XM_039803244.1 | mRNA | upstream | 714 | 22862584 ~ 22883874 (+) | True | me2 |
| XM_039803245.1 | mRNA | upstream | 714 | 22862584 ~ 22883874 (+) | False | me2 |
| XM_039804108.1 | mRNA | upstream | 22715 | 22840502 ~ 22861873 (+) | True | mapk4 |
| XM_039804109.1 | mRNA | upstream | 22715 | 22840502 ~ 22861873 (+) | False | mapk4 |
| XM_039804277.1 | mRNA | upstream | 49518 | 22826626 ~ 22835070 (+) | True | tspan36 |
| XM_039802625.1 | mRNA | downstream | 366242 | 23257261 ~ 23273702 (+) | True | ndufaf2 |
| XM_039802627.1 | mRNA | downstream | 392060 | 23283079 ~ 23330548 (+) | True | LOC120560302 |
| XM_039802628.1 | mRNA | downstream | 392061 | 23283080 ~ 23330548 (+) | False | LOC120560302 |
| XM_039802630.1 | mRNA | downstream | 392062 | 23283081 ~ 23330548 (+) | False | LOC120560302 |
| XM_039804011.1 | mRNA | downstream | 461931 | 23352950 ~ 23354264 (+) | True | LOC120561043 |
| XR_005639510.1 | other | upstream | 1285789 | 21588876 ~ 21598799 (+) | False | LOC120560787 |
| TU85087 | other | upstream | 2206672 | 20676417 ~ 20677916 (+) | True | G63480 |
| XR_005639482.1 | other | upstream | 2395750 | 20477812 ~ 20488838 (+) | False | wdr31 |
| XR_005639483.1 | other | upstream | 2395750 | 20477812 ~ 20488838 (+) | False | wdr31 |
| TU84360 | other | upstream | 3435638 | 19434907 ~ 19448950 (+) | False | rasl10a |
| TU85622 | other | downstream | 38880 | 22929899 ~ 22930205 (+) | True | G63905 |
| TU85875 | other | downstream | 801643 | 23692662 ~ 23693291 (+) | True | G64108 |
| XR_005639471.1 | other | downstream | 1932699 | 24823718 ~ 24834631 (+) | False | cdc14b |
| XR_005639472.1 | other | downstream | 1932700 | 24823719 ~ 24834620 (+) | False | cdc14b |
| TU86491 | other | downstream | 2793953 | 25684972 ~ 25696570 (+) | False | LOC120561182 |
