RNA id: XM_039803548.1


Basic Information

Item Value
RNA id XM_039803548.1
length 3501
RNA type mRNA
GC content 0.45
exon number 7
gene id kiss1rb
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 27521322 ~ 27527883 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agtagTATTGATAAAATAAAACGTGGGCTGTGGGTATGATTTCAGTAGACTGACATGCGTTGACCTTGTTACATGtgaaagtcatttttttaaattctgccCAACAACACACAGTTGCTGGACTCAGAAAATGCATGGACTgtaattaaaatacaaaattgaaAAGAAATAGGGATTTTTGTGACATCCAAGTCTGACGATACGTTACACTCCGACTCTACTCTTCCAGACTTGGCTCAGCTCAGCTGTACTTAGGTTCATCTACAATTTGAGCTGAAGCTAACATTGACTGCAGCTTCTGGATGTTAAGCTGCAGTCATTTTACAGGGCACCAGATCCTTGATAATTATAGGCGATGATGGAGATTTAGTTTGAAAGCACCTGCCacctcagtctctctctctctctctcttactctcacATAAAGGCTCACAAAGCCAATTGACTCCCCGTCTCCTCCAaactctccctcccctccccagtTATGTTGGTCTATAACAGTGCTTTCATCTCAGACCTGCAGAGAACAGCAGCCCATCACTGACCCACGCTTCCTTTACAGAGACGAGAGAGGAACACTGCAGTGgcaaacagacacaacacagATGATACTGGAaccagcagccaatcacagtcCAGACTGTGGGTCCGTGTGCAACGAGTCCGCAGCTCTGGAGGGCCAGGGGCCACCGGTGCTGCTCGACGCCTGGCTGGTCCCCACTTTCTTCGGCCTCATCATGCTGGTCGGCCTGGTCGGGAACTCGCTGGTCATCCATGTGGTCACCAAGCACCAGCAGATGAAGACCGTCACCAACTTTTACATAGTAAACCTGGCCACGACCGACATCTTCTTTCTGATCTGCTGCGTTCCCTTCACTGCCACACTGTACCCACTGCCCAGCTGGATCTTTGGAGAGTTTATGTGCCGACTGGTGAACTACCTTCAGCAAGTGACTGCTCAGGCAACATGTATCACTCTGTCAGCTATGAGTGTGGACCGCTGCTACGTGACCGTCTATCCTCTGCAGTCACTGCGACACCGCACCCCACGCATGGCTCTGGCCATCTCTGTGTCTATCTGGATAGGCTCCTTGCTTCTGTCGATCCCAGTAGCCATGTACCAGCGTCTGGAGGCAGGATACTGGTTTGGTCCTCAGACGTACTGCAGTGAGGTATTCCCCTCGGCCCGCCTCCAAAGAGCCTTCATCATCTACAGCTTCCTGGCTGTCTACCTGCTGCCTCTTCTCACTATAACCGCCTGTTACGCCTACATGCTCAAGCGCATGGGGCAATCGAGTGTGAATCCCATCGACAGCAGCTACCAACTTCAGGCTCATGCAGAGCGAGCAGCAGCAGTGCGGGCGCGAGTCTCCCGGATGGTGGCGGTGATGGTGGCCCTATTCCTCATCTGCTGGGGCCCCATCCAGGTTTGCATCCTCCTGCAAGCTTTTGGCCTCCGCAGTTACGTCCTATACAAGCTGAAGATTTGGGGTCACTGCATGTCTTACTCCAACTCTTCCGTCAACCCGCTGGTTTACGCCTTCATGGGCAACAACTTCAGAAAGGCCTTCAAGCACGCCTTCCCCGCCATATATCTGTGGCGCACGAGGGCGAGAGTCAGGGTGGGAAACATGGACGCAGAGGATGGGGGAGAGACGGATTGCCAGGAACCCAAGGGAGAAGCAGAGATGCAATTTCTTTCATCTGGGTCCTAAAGGTCATGCTGGGCATTTGGACACTGTGCgctcattgtttatttatagtTTGTTCTGGAGATGAGAGCAGTCtgctctcgttctctctctctctctctctctctctctctctctctctcaacacacacacacacacacacaatgaggagCAAAACCTGCCTCTTAAAAGGATAAACCAATCCAATCACGAGCCTCTCGTGACCCTCACAAGCTGCAGAAACACAATTAtctttgtcacatttttttctgtACTGATGCAATCAGTTTGCTGGAGCTCCTGGTTGTATCTTCACAATTTCAAGAAAAGTGTGTAGGACAAGTGTTCTGGGTTAAACACATTTtccaaacaatacaaattctgcTTGGTCTGTTCTGTTTTCAATGGTTCACTGTTATCtcctgtttcttttcttttttctttttccagtgtgtcctgtttttgtgtttgagtAACAGCAGGTTTCACTGCACTGAATTGTTTATTTTGGGACCATTAGTGGAGCTTTATCTTTGGCTACAGTTTCTAGTTATTCTAGTAAAACAGTTCTGGTTAAATTCAACATTTGTAGCAACAGCATCCTTTGTGAACAGCCATCTTGAAAAGAGTGGAACAACATGCACATACATTCACTTTTCACTGTTTCTAGCAAATTGTTTCCTTATTTTATTGTCTAATGCTGTGCTGATCTGTCCTCAGTGGGAGTGGGATAGGATACAGTCAATTTTCCTCTAAAGCCCCAAAACATGCTTCTTTGTCTGTGAGTCTGCATTATGCAGATAATGTTAATGTGTGCAGTAGGAAGCAGTGTTGCATTTACACCCTAGAATATACATGGAATAAAAGAATTCATTAAAATTAAATCAGAGAATAAGTGATTTCACTTTTTGACCATCACTGATTTGAAATGTTCAAATCCCTGCAGGGCCCATTGATTAACTGAGATATTGTAAAAAGAACAGCCAAATGTTATTACTATTGTATTTTCCCAAACATAGGCTGcttgtaaaagaaagaaagttttaGATAAAGGGAAAATATAAACAACTTACATTATAGTCTAAACAGGTGCATCTGCTGCAGGGTTTCATCCCTTCACTACAGTTATTTGTAATACAGTGACATTAGTCTTGGTTCAATAAACATTCTTTAGTGATACTACATTGCTTACTGTGATATTAATAGTTGACAATGTAAAGCTGCTTTGCACTAAAAGTGTTCGTCTGTCTGACTCGTTTGTGTCTCGCGTGCGATCACATTTGTGTGGCGTGACAGTGGAGCCAATCAGTCCAGAGCTAAATTTATGGTCACCAATGACAGCCGTTTACCTAACAGACAAGTCCCAGCCAATGGGGTGGCTGGCTGACAATGTGGGCCTTGTgatgcagaaaacatttacaaaacatAGTAGAGTGCACATAAACAGTGTAACATGTGACAACCTTTTATTTACTGTCAATGGTGACACCCCAACATGTGCAACATGTGACAACCCAAGCCTGGATTATCAACTGAGAAAGTGAACAGCTGTGAATAGTGAAGGTATACCCATGTGAACATAATTGAAACAGGTTTTTCTTGCTGTAATCATGTCACTTTGGACACGCCCACTTGATTTATCTAACCCAGACTGCTGAATCTGAGTTGCTCCAGATAAACTTTGATGTTATTTTTGCACATAACAAAGGCTGGTGGCCGTAACCTAGGTTATGGTCTCTGTCTTATTGTTGTGTAGCAGCCCTGACACTGCTCATGTCCCACAAGAATTCCTCCCTATGTGTAAACTTG

Function

GO: NA

KEGG:

id description
K08374 KISS1R; KISS1 receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87249 lncRNA upstream 44356 27476748 ~ 27476966 (+) True G65171
TU87150 lncRNA upstream 131460 27389457 ~ 27389862 (+) True G65108
TU87147 lncRNA upstream 142107 27378998 ~ 27379215 (+) True G65106
TU87122 lncRNA upstream 150363 27299932 ~ 27370959 (+) False G65084
TU87119 lncRNA upstream 170767 27299932 ~ 27350555 (+) False G65084
TU87374 lncRNA downstream 375192 27903075 ~ 27904933 (+) True G65272
TU87444 lncRNA downstream 474656 28002539 ~ 28005121 (+) True G65314
TU87497 lncRNA downstream 843573 28371456 ~ 28371841 (+) True G65362
TU87515 lncRNA downstream 934742 28462625 ~ 28463104 (+) True G65378
TU87522 lncRNA downstream 1093202 28621085 ~ 28621299 (+) True G65385
XM_039803551.1 mRNA upstream 882 27516790 ~ 27520440 (+) True LOC120560745
XM_039803552.1 mRNA upstream 4733 27510426 ~ 27516589 (+) True isca1
XM_039803647.1 mRNA upstream 11687 27485702 ~ 27509635 (+) True tut7
XM_039804557.1 mRNA upstream 48503 27470256 ~ 27472819 (+) True gpx8
XM_039802087.1 mRNA upstream 79126 27433995 ~ 27442196 (+) True areg
XM_039803550.1 mRNA downstream 1367 27529250 ~ 27537821 (+) True psat1
XM_039804348.1 mRNA downstream 37076 27564959 ~ 27600806 (+) False LOC120561295
XM_039804349.1 mRNA downstream 37076 27564959 ~ 27600806 (+) False LOC120561295
XM_039804347.1 mRNA downstream 51137 27579020 ~ 27600806 (+) True LOC120561295
XM_039803964.1 mRNA downstream 80225 27608108 ~ 27624072 (+) True mccc2
TU87117 other upstream 219552 27205234 ~ 27301770 (+) True G65084
TU86927 other upstream 863353 26645020 ~ 26657969 (+) False si:dkey-178e17.1
XR_005639500.1 other upstream 878841 26614237 ~ 26642481 (+) False cltcl1
TU86791 other upstream 1024994 26494335 ~ 26496328 (+) False c6h22orf39
TU87830 other downstream 1822241 29350124 ~ 29351753 (+) False ubac1
XR_005639517.1 other downstream 2658965 30186848 ~ 30212108 (+) False fbxo21
TU88038 other downstream 2719004 30246887 ~ 30250240 (+) False LOC120560820
TU88040 other downstream 2720056 30247939 ~ 30250268 (+) False LOC120560820
TU88039 other downstream 2720100 30247983 ~ 30251519 (+) True LOC120560820

Expression Profile