Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039803745.1 |
| length | 1297 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | LOC120560867 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 8387822 ~ 8389118 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| K08778 | ASTL; astacin-like metalloendopeptidase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80713 | lncRNA | upstream | 15271 | 8372266 ~ 8372551 (+) | True | G60120 |
| TU80698 | lncRNA | upstream | 60869 | 8325053 ~ 8326953 (+) | True | G60109 |
| TU80663 | lncRNA | upstream | 74709 | 8302258 ~ 8313113 (+) | True | G60080 |
| TU80668 | lncRNA | upstream | 149034 | 8235559 ~ 8238788 (+) | True | G60084 |
| TU80667 | lncRNA | upstream | 151295 | 8235559 ~ 8236527 (+) | False | G60084 |
| TU80747 | lncRNA | downstream | 28524 | 8417642 ~ 8417850 (+) | True | G60147 |
| TU80748 | lncRNA | downstream | 34071 | 8423189 ~ 8423743 (+) | False | LOC120560006 |
| XR_005639402.1 | lncRNA | downstream | 39835 | 8428953 ~ 8431230 (+) | True | LOC120560009 |
| XR_005639401.1 | lncRNA | downstream | 45623 | 8434741 ~ 8437598 (+) | True | LOC120560008 |
| TU80762 | lncRNA | downstream | 47829 | 8436947 ~ 8437592 (+) | False | LOC120560008 |
| XM_039803057.1 | mRNA | upstream | 183636 | 8173021 ~ 8204186 (+) | False | bicdl1 |
| XM_039803058.1 | mRNA | upstream | 183759 | 8172560 ~ 8204063 (+) | True | bicdl1 |
| XM_039803083.1 | mRNA | upstream | 304448 | 8078302 ~ 8083374 (+) | True | LOC120560501 |
| XM_039803082.1 | mRNA | upstream | 309654 | 8055365 ~ 8078168 (+) | True | mtmr3 |
| XM_039803966.1 | mRNA | upstream | 336482 | 7948431 ~ 8051340 (+) | False | cux2b |
| XM_039803746.1 | mRNA | downstream | 8363 | 8397481 ~ 8402569 (+) | False | LOC120560868 |
| XM_039803748.1 | mRNA | downstream | 10552 | 8399670 ~ 8402569 (+) | False | LOC120560868 |
| XM_039802097.1 | mRNA | downstream | 34594 | 8423712 ~ 8427745 (+) | True | LOC120560006 |
| XM_039802096.1 | mRNA | downstream | 34594 | 8423712 ~ 8427745 (+) | False | LOC120560006 |
| XM_039802098.1 | mRNA | downstream | 43834 | 8432952 ~ 8434672 (+) | False | LOC120560007 |
| TU80548 | other | upstream | 352461 | 8028192 ~ 8035361 (+) | False | cux2b |
| XR_005639609.1 | other | upstream | 688571 | 7699133 ~ 7699251 (+) | True | LOC120561497 |
| XR_005639608.1 | other | upstream | 689777 | 7697927 ~ 7698045 (+) | True | LOC120561496 |
| XR_005639610.1 | other | upstream | 694613 | 7693091 ~ 7693209 (+) | True | LOC120561498 |
| XR_005639604.1 | other | upstream | 697030 | 7690674 ~ 7690792 (+) | True | LOC120561492 |
| XR_005639399.1 | other | downstream | 42419 | 8431537 ~ 8434672 (+) | False | LOC120560007 |
| XR_005639400.1 | other | downstream | 42419 | 8431537 ~ 8434666 (+) | True | LOC120560007 |
| unassigned_transcript_244 | other | downstream | 55336 | 8444454 ~ 8444525 (+) | True | trnaw-cca_2 |
| unassigned_transcript_245 | other | downstream | 56500 | 8445618 ~ 8445689 (+) | True | trnaw-cca_3 |
| unassigned_transcript_246 | other | downstream | 57662 | 8446780 ~ 8446851 (+) | True | trnaw-cca_4 |
