Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039803767.1 |
| length | 1525 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 4 |
| gene id | tubb2b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 12921169 ~ 12923705 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0007017 | microtubule-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0005874 | microtubule | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0005200 | structural constituent of cytoskeleton | molecular_function |
| id | description |
|---|---|
| K07375 | TUBB; tubulin beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81914 | lncRNA | downstream | 46553 | 12836649 ~ 12874616 (-) | True | G61119 |
| TU81927 | lncRNA | downstream | 74883 | 12837971 ~ 12846286 (-) | True | G61128 |
| TU81922 | lncRNA | downstream | 132849 | 12786963 ~ 12788320 (-) | True | G61124 |
| TU81871 | lncRNA | downstream | 274602 | 12646366 ~ 12646567 (-) | True | G61085 |
| TU81870 | lncRNA | downstream | 276217 | 12644728 ~ 12644952 (-) | True | G61084 |
| TU81953 | lncRNA | upstream | 51184 | 12974889 ~ 12975146 (-) | True | G61151 |
| TU81956 | lncRNA | upstream | 54047 | 12977752 ~ 12978029 (-) | True | G61154 |
| TU81963 | lncRNA | upstream | 83541 | 13007246 ~ 13007459 (-) | True | G61161 |
| TU82006 | lncRNA | upstream | 257882 | 13181587 ~ 13182319 (-) | True | G61193 |
| TU82013 | lncRNA | upstream | 258885 | 13182590 ~ 13184478 (-) | True | G61195 |
| XM_039804527.1 | mRNA | downstream | 228823 | 12673697 ~ 12692346 (-) | True | LOC120561416 |
| XM_039804528.1 | mRNA | downstream | 232697 | 12673697 ~ 12688472 (-) | False | LOC120561416 |
| XM_039804465.1 | mRNA | downstream | 252043 | 12652618 ~ 12669126 (-) | True | nelfb |
| XM_039804115.1 | mRNA | downstream | 278013 | 12641855 ~ 12643156 (-) | True | LOC120561146 |
| XM_039804145.1 | mRNA | downstream | 286046 | 12610416 ~ 12635123 (-) | True | arrdc1a |
| XM_039804293.1 | mRNA | upstream | 21139 | 12944844 ~ 12948355 (-) | True | LOC120561256 |
| XM_039804296.1 | mRNA | upstream | 101710 | 13025415 ~ 13031917 (-) | True | LOC120561258 |
| XM_039804297.1 | mRNA | upstream | 113123 | 13036828 ~ 13038447 (-) | True | LOC120561259 |
| XM_039803114.1 | mRNA | upstream | 135785 | 13059490 ~ 13060793 (-) | True | LOC120560514 |
| XM_039804294.1 | mRNA | upstream | 160778 | 13084483 ~ 13094496 (-) | True | LOC120561257 |
| TU81433 | other | downstream | 1731428 | 11189142 ~ 11189741 (-) | True | G60715 |
| TU80745 | other | downstream | 4518603 | 8401022 ~ 8402566 (-) | True | G60145 |
| TU80531 | other | downstream | 5033766 | 7879424 ~ 7887403 (-) | False | anapc7 |
| TU80421 | other | downstream | 5336650 | 7584086 ~ 7584519 (-) | True | G59881 |
| unassigned_transcript_243 | other | downstream | 5409878 | 7511221 ~ 7511291 (-) | True | trnag-ccc |
| TU82089 | other | upstream | 665334 | 13589039 ~ 13589332 (-) | True | G61264 |
| unassigned_transcript_252 | other | upstream | 2015270 | 14938975 ~ 14939047 (-) | True | trnaa-agc_14 |
| unassigned_transcript_253 | other | upstream | 2020791 | 14944496 ~ 14944568 (-) | True | trnaa-agc_15 |
| unassigned_transcript_254 | other | upstream | 2025054 | 14948759 ~ 14948830 (-) | True | trnae-cuc_15 |
| unassigned_transcript_255 | other | upstream | 2027797 | 14951502 ~ 14951583 (-) | True | trnas-gcu |
