RNA id: XM_039803768.1


Basic Information

Item Value
RNA id XM_039803768.1
length 862
RNA type mRNA
GC content 0.57
exon number 3
gene id bcl2l16
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12909814 ~ 12932999 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tacagacacacttcaCTGAGACCCCAACACTCGTTCACCTGCTGgctgtttcttttttatctgTGTATGGCGTATGGCGAAGAGGAGCATCCCTACATCGCCATGACAGACTGATGTGACTTAGAGAATGGCTTTGCTGCCTGGTACTGGAGCTGTTATCTGTGTCCTACTGACCATCCATCTTGGTGATTAGTGAAGTGGCAATTGGAGAAGACCATGTGTCAGTCGGAGGTGCCAGGGGCCAGACTGGGCCTGAATAGTCCTGACCCGCTGGTGAGAGAGGCTTTTCTGATGGCCCATGACTACATAGACTATGTAACCACAGGCGGGGCAGATGGCGCCATGGGTCCAGCTCCTACAGCCTGCACCACGGCCCTGCGCTACGCCGGAGACGAGCTCCTCACCCGCTTCCCCATCTTCTTCCGGCGCTGGCCTCGGGTCTTCCAGGACGTGACAGAGAACACGGCCTGCCCCACGCTCATGAGCATCCTGGATGAGCACTTCTTCCCACCAGTCCCTGGGGGGCGGCGCAGGGACCTGGCCTGGAGCGCCGTGCTATCGGTGTATGTGCTGGCTGGCCAGATGGCTCTACATTGCCATGAGAGGGGCATGCCGGGGGTCCTGCCACAGCTGAAGGAGTGTGTGGGGTCCTATGTGGAGAGGGTCATCTGCCCTGAGATACGAGACAAGGGAGGATGGAGTGGTTTTGTATCACGCTTTGGAGAGAAGCAGGGCTTGGAGGGCCAGGTGAAGAAAGGGTGCTGTTGGACACTGCTGGCATTGGCCATAGGCATCCTCACCTACTTCTTGTGGAAAAGAATAGCTTAGCCAACACTGCCACCTAGTGTCCACAACCAAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81877 lncRNA upstream 227746 12679709 ~ 12682068 (+) True G61091
TU81853 lncRNA upstream 270954 12638608 ~ 12638860 (+) True G61067
TU81834 lncRNA upstream 300356 12609104 ~ 12609458 (+) True G61053
TU81833 lncRNA upstream 301757 12607644 ~ 12608057 (+) True G61052
TU81831 lncRNA upstream 305604 12603756 ~ 12604210 (+) True G61050
TU81962 lncRNA downstream 78988 12999459 ~ 12999887 (+) True G61160
TU81973 lncRNA downstream 250322 13170793 ~ 13180491 (+) False LOC120560904
TU82004 lncRNA downstream 261111 13181582 ~ 13182257 (+) False G61192
TU82005 lncRNA downstream 261111 13181582 ~ 13182308 (+) True G61192
TU82008 lncRNA downstream 262148 13182619 ~ 13184450 (+) True G61194
XM_039804579.1 mRNA upstream 44562 12860590 ~ 12865252 (+) True si:dkey-90l8.3
XM_039802811.1 mRNA upstream 71907 12831272 ~ 12837907 (+) True ccn1l2
XM_039802813.1 mRNA upstream 71907 12831272 ~ 12837907 (+) False ccn1l2
XM_039802812.1 mRNA upstream 71907 12831516 ~ 12837907 (+) False ccn1l2
XM_039802806.1 mRNA upstream 115383 12754701 ~ 12794431 (+) True fkbp15b
XM_039803795.1 mRNA downstream 211627 13132098 ~ 13180369 (+) True LOC120560904
XM_039804576.1 mRNA downstream 428670 13349141 ~ 13366210 (+) False lhx2b
XM_039804575.1 mRNA downstream 428671 13349142 ~ 13366210 (+) True lhx2b
XM_039804373.1 mRNA downstream 647088 13567559 ~ 13646350 (+) True adgrd2
XM_039804374.1 mRNA downstream 647088 13567559 ~ 13645504 (+) False adgrd2
TU81647 other upstream 983213 11926183 ~ 11926601 (+) True G60897
XR_005639564.1 other upstream 2157374 10748116 ~ 10752440 (+) True LOC120561144
XR_005639563.1 other upstream 2157374 10748116 ~ 10752440 (+) False LOC120561144
XR_005639565.1 other upstream 2157374 10748116 ~ 10752440 (+) False LOC120561144
XR_005639562.1 other upstream 2162866 10726446 ~ 10746948 (+) False LOC120561142
TU81938 other downstream 676 12921147 ~ 12923836 (+) False G61139
TU81939 other downstream 676 12921147 ~ 12923836 (+) True G61139
TU82171 other downstream 1187012 14107483 ~ 14109546 (+) True G61337
TU82172 other downstream 1220971 14141442 ~ 14142050 (+) True G61338
TU82219 other downstream 1362946 14283417 ~ 14283871 (+) True G61383

Expression Profile