RNA id: XM_039803791.1


Basic Information

Item Value
RNA id XM_039803791.1
length 2805
RNA type mRNA
GC content 0.46
exon number 12
gene id ggt1a
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2577875 ~ 2592746 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTTGGAGCAGAGGACACTTGTTTCTGAGCTGAAGGATTGTGTCTGACTCTGAGGTGTCGATTTTCCCCGGGCAGGAAAATGGTTGGGAAGTCCCTGATTGCTGGTCTGGTGGTCCTTCTGGTGGCTGCAGTGAGCCTGTTCCTGGGGGTGTTCATGGGCTTGGGGAAGAAAAACACACCTCCCCCCATGGACCACTTCTACTCAAAGGCTGCTGTGGCTGCCGATGCTGGAAAGTGTTCAGAAGTGGGGAGgGACATTTTGAAGAAAAACGGTTCTGCCGTGGATGCTTCTATCGCTGCCTTGCTATGTGTCGGCCTTTTGAACGCTCACAGCATGGGCATCGGGGGAGGGCTCTTCTTTGTCATCTATGACGCTTCCACAGGGAAGGTGGAAACCATCGATGCGAGGGAGACGGCGCCGATGAACGCCACTGAAGATATGTTTGGCAACAATACCAAGCTTTCTCGTACAGGTGGATTGTCCATAGCCATTCCCGGGGAGATCCGCGGTTACGAGATGGCCCACAAGAGGCATGGCAGGCTGCCATGGAAAGACCTGTTTGAGCCCAGCATCGCCTTGGCTCGAGATGGATTTCCTATAGGAAAAGCTTTGGCTCATGCCATCTTCAAGAGCAAAGATTCCATTCAAAGAGACGCCAACATGTGTGAGGTGTTTTGTGATTctcaaaaaaaaatactgaaggAAAACGATATTGTTAAATTTCCAAAGCTGGCCGACACGTACCAAAGGATAGCAGAAGAGGGGCCAGATGTGTTTTATAACGGGTCGATGGCACGGAGCATCGTCAAGGACATCCAGGCTGCAGGCGGCATTATCACCCTGGATGATTTGTTGGAGTACCAACCTGTGCTGAATGAGAACCCTTTGAAGCTGAACCTTGGTGAATACACCATGCATGTCCCAGACGCCCCCTCCAGTGGCCCTGTGCTGGCACTCATACTCAACATAGTGGATGGCTACAACTTCACAGACACAAGTGTGTCTACGGCAGAGAAAAAGACTCTAACGTACCATCGGATCCTAGAGGCTTTTCGTTTTGCCTATGCCAAGAGGAGCAGACTCGGGGACCCACGTTATCTCAACATTACTGATCTCCTCCTAAACATGACCTCAGACTACTTTGCTGATGGCATCAGGAGTAAAATTACAGACGacaccacccacccagacagCTACTACGAGCCAGACTACTTTGTCCCAGACAACCACGGGACCGCTCACCTGTCGGTCATAGCTGAGGACGGAAGCGCTGTGGCGGCCACCAGCACCATCAATCTATACTTTGGTTCAAAAGTCATGTCTCGATCGACTGGAATCATTTTCAACGATGAAATGGACGACTTCAGCTCTCCGTACATGACCAACGGCTTTGGAATCCCTCCTTCACCCAACAATTTCATTCAACCAGGCAAGAGGCCGCTGTCTTCCATGTGTCCTACCATCATCTTtgacaaagacaacaaagtgAAAATGGTTGTAGGAGCGTCCGGGGGCACAAAAATCACCACAGCCACTGCCTTAGTCATCCTAAACTCCTTGTTCTTCAACTATGACCTAAAGAAAGCTGTGACCGAGCCACGGGTTCACAATCAGCTCAACCCAAATATGACAGTAGTGGAGCAGGGCTTTGAAAAGAGTGTTGTGGACGGTCTGGTCCAGAAGAACCACGTAACACAGCTGCTGCCGACTCCAGACTCCGTGGTCCAAGCGGTGGTGCGGCAGGGAGAGCGTCTCTGTGCCGAGTCCGACCCCAGGAAAGGAGGCTATCCAGCCGGGTACTGACCGGGACTTCAGGGCCTTCTGTACTCCTCTCAGTCTGGACAGTCTCCTCAAAGACACTCGGGAAGAGCCACAATACAAAGGTGCCTGCACTGAAGACTCAAAGCAGTGTTTAAGCTATGGAGACACAGCCACCCGTTAACGTTCACTCAAACATGGAAAAGGACTCCATTCCAAAACCTCTTTTACTCAAACTCAATTATtcagcatttcatttcattctttttttctaaccctaatccttaTATTTTTGAGTTTTGAAGTAAAATAAGAGGTTGCACCTAGTTTGATTTCTGTATCATCACTACTGGGCATGTTTTGGGGAGGCCCAAAACACCATCTGCTTTATATAATAAACCTGTTATGTATGACAGTATCCAACATATTAAAAACAACCAAGTAAGTACCAAGAATTAGTGAAAGGATAAAGTTTCATCACTATGTATCTTTTAGGTAAGAATCTGAGTTGGCTGTAGGTTGTCCATgtactattttcatttattttattgtctaAGGAAAAGCTATTGTGAATAATTGGACAATTTGTCTGAgcatggggggagggggagggttGTTACCATGTCAAACTGGTGAAAAACCATCAATTTAAAAACTAGACCTATACCAATTAAAAATAAGGACACCTCAGGTTGTTCGCCTGTTTTATACCGAAATCTTTCTCCTGGTGTAAGTTGATCCTGAAGCGAACATTATTAAGAGGAAACTGACGGTGTTGTTTTCTACCGTGACTCTATAGTGAAAATTATTACTTTAgaattgtaaatgtttaatATCGAGTAGCGGTTAGGTGAATGTATAGTGTATTttgaaaaatacatttgcaGATATATTTTTCTAAACATGCATTGTTCTTATGCCATGTTTGTTAttaaacattttgaacaaagatgTTATATTTTACCACACGGACCCTCTGGGTATTTCTGTGCTGTTTCTGTAACTAGAATATTAGGCATGAAATAAGAATACACTTTCTTTTAGTA

Function

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU78800 lncRNA downstream 22091 2556645 ~ 2556863 (-) True G58625
TU78777 lncRNA downstream 27915 2550840 ~ 2551039 (-) False LOC120560995
TU78765 lncRNA downstream 60753 2517955 ~ 2518201 (-) True G58596
XR_005639571.1 lncRNA downstream 87160 2491267 ~ 2491794 (-) True LOC120561196
TU78755 lncRNA downstream 99346 2476272 ~ 2479608 (-) True G58588
TU78863 lncRNA upstream 123155 2715901 ~ 2716316 (-) True G58678
TU78904 lncRNA upstream 208996 2801742 ~ 2801971 (-) True G58716
TU78913 lncRNA upstream 220625 2813371 ~ 2813695 (-) True G58725
TU78936 lncRNA upstream 241442 2834188 ~ 2837683 (-) False LOC120561349
TU78940 lncRNA upstream 280609 2873355 ~ 2873629 (-) True G58748
XM_039802997.1 mRNA downstream 26260 2551428 ~ 2552694 (-) True LOC120560454
XM_039803937.1 mRNA downstream 27588 2550046 ~ 2551366 (-) True LOC120560995
XM_039802995.1 mRNA downstream 41395 2537218 ~ 2537559 (-) True LOC120560452
XM_039802119.1 mRNA downstream 70140 2504472 ~ 2508814 (-) True LOC120560021
XM_039804524.1 mRNA downstream 222684 2353073 ~ 2356270 (-) True lrrtm4l2
XM_039802027.1 mRNA upstream 26469 2619215 ~ 2627761 (-) True ggt5a
XM_039804090.1 mRNA upstream 74516 2667262 ~ 2671095 (-) False si:ch211-170d8.2
XM_039804089.1 mRNA upstream 74516 2667262 ~ 2670098 (-) True si:ch211-170d8.2
XM_039804088.1 mRNA upstream 77488 2670234 ~ 2683703 (-) True hps4
XM_039802183.1 mRNA upstream 93145 2685891 ~ 2689087 (-) True si:ch211-107p11.3
XR_005639512.1 other downstream 439326 2137796 ~ 2139628 (-) False ankrd39
XR_005639501.1 other downstream 920907 1532053 ~ 1658047 (-) True rimbp2
TU78855 other upstream 93930 2686676 ~ 2688849 (-) False si:ch211-107p11.3
TU78857 other upstream 97864 2690610 ~ 2692522 (-) False LOC120561394
TU79176 other upstream 804423 3397169 ~ 3397496 (-) True G58919
TU79177 other upstream 822881 3415627 ~ 3416854 (-) True G58920
TU79274 other upstream 1095883 3688629 ~ 3689338 (-) True G58994

Expression Profile