RNA id: XM_039803802.1


Basic Information

Item Value
RNA id XM_039803802.1
length 6533
RNA type mRNA
GC content 0.47
exon number 5
gene id gas2l1
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19376194 ~ 19399253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGAGTCGCTCTGCTGGTCTAAGCTACAGCAGGTCAACATATTCAGTGCAAGAGGCGGGACTATTTGCAGGGAAGATGAGCTGTGGACTCAGTGCTGCTCTGTGGTCTTGATTATATCGATGAGGAGCTGACTGACCGCCACACAGACATGGTCACACGTGGATTTTTGTGGGTGAGAGGACCCACCGCCCACCGGGTGGATTAACGGATCGTCGCATGGGTGTGTATCGGCGTCCCGGACTGCTCCACTCTCCTTCTCATTCCGGGACCCGGCGATGCGCTCTTTAAAGGAAACGGGTTTCGCAGAGACATCCGGAAAACGCATCCATGCGCCACGGCCAGTCCGCATCCCGATATGTCTCTGACAACACAAAGCCTGGTTTCAAGGAGCTCCCATAAGAAACCAGATATGCCATCCGGAATGGGTGCGTCAACACGGTTATTTTGCGGATGACGCTTTGGAGTGCAGTTGTGCAATGAGACAATTTGGAATTATCAAATAGACTTTATTGATAGGCGGCAACACATAATTCGACAACATGGCTGATCAGAGCAACATCCAGTCCTCCGCCTCCAAGAGTATCCGGCCTTTTAAATCCAGCGAAGAATACCTGTATGCCATGAAGGAGGATCTGGCTGAATGGCTGAACACCCTGTACGATTTGGATATCACTGCGGACACCTTTATGGATGGGCTGGGGACGGGCTGTGCCCTCTGTCGGCACGCCAACAACGTGAACCGCGCCGCGCTGGACTTCCAGCTGGAGTACCCGGAGGCTGCAAACTCCATGAAGGTGCCATCTAAAGATGTGGTCTTTCAGTCACGCAATGTTGTTCCTGGCTCGTTCGTGGCGCGGGACAATGTGTCCAATTTCATCAGCTGGTGCAGGCAGGAGCTCTGGATCAAGGACGTCCTCATGTTTGAGACAAATGACTTGGTGGAGAGATGCAACGAGAAGAATTTTGTTCTGTGTCTCCTTGAGGTGGCGCGACGTGGGTCCAAGTTTGGCATGTTGGCCCCCATGTTGAtccagctggaggaggagatcGAGGAGGAGATCCGGGACCAGGAGAGCCTGCGGAGTGATGCAGGGGAGCCAGTTGAGCAGAGCCCGCCCAGCAGGTGTTTCAGTCGGAAGGAGAGCAGTCAGAGTGTGGAGGATGAAGATGAACCTGATCCAGAGCCTTTCATCTGGCCGCAGAAGAGGGTTTTATGTGACATGCGCAATTTGGATGAGTTGGTGCGTGAGATTCTGGGCCGGTGTTCCTGTCCAGCTCAGTTTCCCATGATCAAGGTGTCGGAGGGGAAGTACAAAGTGGGAGACTCCAGTGCATTGATCTTCATAAGGGTCCTTCGTACTCATGTGATGGTGCGTGTTGGAGGGGGCTGGGACACATTAGAGCACTATTTGGACAAGCATGACCCATGTCGCTGTGCTGCTTTCGCCCACCGCTACCACCAGGCTAAAGCCAGTGGCCAAGGTCAGGGAGCCCAGAGCAAGTCCTCGAGCGCCCACTCCTCCCGCTCCACTAGCCCAGGTCCACACTGGCGAAATGATGGCATCGCACCTTACAAACCTACAGACAGGCGCTCCTTGGAGCCCCCCTCTGCTCCATGTGCCTCTTCTTCCTCCACGCGGCCCGGCCGCGCACAGAACCCGTCTGTCACCACCGAGCTCGACTCCGGCGCAGCACGCACTCTACTTCCACGGCCGCCACGAGACCGCTCAGAACCTCGCCACTTTAATCCTCTCAGGAATAAGGAGACAAAGTTGCCAGTGACAAGACGTCTGTCTGGAGACAGTGACTCCTCTACAGCCTCCTctaagggagggggaggaggaggaggagtaggggGACGGTACTCTCAGGGTGGTGCCTCACGACGTTCTGGTGATGAAGTAGTCCTGCTTGTCAATCGCAAGGAAGGGAAGCATGTGATAGAGAGGCCTGGTGCTGGAAATCAGACCCCATCCCTGCGTCCCTCACTGCCCCGTGCTCGCAGTCAATCTCGGGAACGTCCTGGTCTCGCTCCAATACTCAAACCGAACCCACCACAAGGATGCGCTGATGGATCGCGAACATCCCGCACAGAGAGAGGCCGCTCTCTCGGAAACGAGGGCCCGAGGAGGCTCCATGCACAACGTTCCCACAGCCAGAGTAAGTTAACCTGCCGTACTCGGTCCAGTGATGCCAGCCCAGGACCCGCTTCCTGCTATAGAGACCCTCAGCCCCCACCTCCGGACAGACGAGAGGACCTTCGGGGCAAACAATTGCCCCCATCCTCTCCCAGAATAGGTGGTGGGTTCACCAAAAGGCAGTCGTCCTCATGCTCTAACTCGCCTATTAAAGGGGTccagaacaacaacagcagccccAGCAAAAAAATTATAACTACTCCCAGACCCCCTGCACCTCGCTCACCCTCCATAGGAAAAGGCAGACTTCTGCCACCAGTCACCTCAGGAGGGCGGCGTTCACCTCACTCAACTCCCCGCAACTCTCACCATCATACTGCCCGCTCCCCTCGGACATCACAGGGCCCTCGCTCTGCTGGGCGAGGCCACCATAGAACCTGGTCTGGCCTGGAGTGTCAGGAGCCCGAGGAGGAAGGACTAGGCCTTGGCTTCCAGATGTTGCCAACACTAGACCCCCAGAAAGAGCTGGACTTGTATCGCAGCTTTGAGGCTGAGTTTCTGGCCAATACACAGCAGGCTAGAGGAGTGTCTTGTAGAGCGCCAGAAAGAGCGAGCCTGCAGGGAGCTGGGACACATTTAATACCAGCACCCGCTGATCCTAATGTCACTGACTCTGCCTATTCCTCCTCTAACTCTTCCACCTCCTCCCTGAATGTGGGCGCAAAGATAGGAACTCTGCCTGACCTCAGGGAATCCAAGAGAACTAATTCCCGTCATTTCCCACTGGAGGACTCCTTAAATTTACTTCATGGACACAATTTTGGAGGACCACACAACTTAAGTCAAGGAGCGCCTGAGCACTGGGGGGAGCGTGGAAGGGGTCTCAAGAAGCTCCCAGCCATCTCTAGCTCCATTGAGGAGAGAGAACCTCCTTCCTCCCTGCCTGGTCttggagacacagacagattgaTGAATCAGGTCCCCTCACAACCTGCTTTCCACTGTAGGAATATGAATGGAGACCATGGAGGTTGTCCTCCCACAGGGGGGCTGACAGGTCAGCAGGGTCAGCTTGGCTGGGGCACAGGACCTGAAGGAGATGTTCCTCTGGAGAATCACCAGCCAAACCTCCCTCATGACCTAGAAAATGGTGACAGCAGTGACGACCTCCCGCCCCCAGAGGCTTGTCCGTCACCTGTGCCTCTTCCCCCCTCTGAGGACTGCTCCTTCCAGGATTCCTCTAGTGAAACCTCTTCCATGTGCTTCAGCCTGAGCGAATCACGTTCTGAATCCCCCCCACCAGCTTCACCACCGGCCAACGGGGACTCCGAAGGAGAAGGGCTGCAGACTAAGAAAGGGCAAAAGAAGGCACACAGCGTAGCCCCTATCTCTAAGCACAAACTGAGAGGCAGGTTGAGGCCTCGCACTGACAACAGGCCAGAAAACAGCCCATCACGTATCCCCACACCGGTCAGCTACAGAGATCTGCAGGCTTACGACACGTTTTCCCCAAACCACACCCCACCGCTGTCCCCTCAGAGCTCGCGCTCTACTGGTCGTCCAGCCACATGCAAGAGCCTGCACCAGGCTTTCACAGATATGATCCATCCTCAACCACGTTCCCCAGCAATGGGCAACAAAGATTGCTCCTACCCTGGACAGTCAGGGAGCCTGAAGCTTGGATGTAGCACAGATGACACAGGGGGTTGTTGTCATGAACAAACTTTGACtactgtgtaaaaaaaagacTTGAGATTGGGCTATAGACTTTCATTGCATGTCTAACACTCCTTCTTTTTCACTTAGTTTCTCCTCTGAATACCTGCAGGGGATTCAAATTGCTTTTATGTTGCACTCAAGCCAAATTATTTATTACCAAAGGAATGGTCTTTAATATTACTTTTACTGTCTTTTCATGTGTGCATGGGGATGCTTTTGCCAATCATACGGTTTGTTTTTGCAAAGACACTTGTGAAATTCTCATGGTTGatacagagagatggagagagagcaTATGTGCTGCCATGTGCCCCACTGAGGGGCATGGTGAAGTGCCAGGGATTTTAAGCTGCAACTCTATAAACAGTGTCAACACTACATCTTTAGTCAGATGGATTGGCTCCCTCTTGTGGTTTGCCACAGCATCTCTGCTTGCCTTGATAGTCAAAATACTGGTGACTGTGATATTTTCAGTCTACCCTCAGTTGTGTGTTTCATATAGGACTCATTATACTCACATTTACAAAATACTAATAGGTAACAAAGACAAAGGTACCCCCATCATTCCTCTGACATTATGAACACTACATGCACTACCAATCTCTGTACATTGGTCTGCTGTTATTAATGTATGATGCCACCTTTTCACAACAATTAATGTAGTTGAGATAGATATCTGTTTTTAAATGCTTACAGGTGTTCAAGATTCTGTTTAAtgcagtaaaacattttaactttatttctacTCTTACGTGGATTAAGTGAAAAAATATGAGGAGCAGTGAAGGTTGTATTACTTTGTGTCATTGTCACTGAAACAGAATTGTTGGAAGCGACTCCTCTGACCAAACTGTACTCTGGAATACATTgctacatatatacacatgtcTAAGGCTTAggagaatgaatgtgtaaaTACATGTTGATGTACTCACTAATACATGTGGGTATTGTGTATATAAAAAGGCATTGAATATACAGTTATTGTACATATCACTGTATCAGTTCTGTGCTGCCTTAGCTATGCAATATTGGTGTTGGAAATGCCTTGACAATTCCCTTTGCCTTAAAATATATTCGCAGGTTagtttttgaatgtttttgctCAACATCACTAAGATCTATTCGTTAACACTACATTGCCATCATTAACTATTTATGATAAAAGAAATTGGAGAGTTTGAGTGTGAATGTGGAAATAAGTAAGGAACATTGCCAATTTAATCATTATACTTGATGTAGGTGTAAAATTCATGTTAAAGATATATAATGTATTGCCTCTGAATACTATTAGTTGTTTTGAAACACAAGAAGCCAGATAACCTACTTAGCAGATGGATTTCAAAGACACGACACAATCTGTGGTGACATCTAGTGGCTAAAGAAAGACATGTTTTATTAACAGTAAAAAGGGacactgttttctgtttttggaaTGTGTTCTGGGGCTGATTAGAGCCAATAACAATGCTATTATGAGGGAAAGTTTGATGAATGAAGAATGACTTTGACTTGagtgtctgaatgtgtgcaACAGTGCATGAATAATAGATACTGTAACTGGATATTAGCGTTCTCTTGTGAAGCTCGTGCACAGTTGTCAAGAGTATGAGAGGCCAAACCCCAGCTACAGTACTTCTGTactttgtaaaatatatttgaaagTGGAAAAGTTTGGCTTGTTGTCCAGTAAGAGAAGTTGGTGGCCATTTTCTTTTGATGTGTTTACAATGGTTGTTTcagtaaaaaatacaatttcagtaaaaaaacaaaagcaacatttgtggATAGCAACTTTTTGCTTTTTGGCACTGACACTAAAtggacaagaaaaaaagaagcgtgtgcatgtatttgtgtatgtatggtATGAGAATATTTACAGAGTTGGAGTGAAGTGGGGACTGATGTAGgtctaatttatttatttatgaaatttaatttaattttgggCTCAAGTGACATCTGTGTCCCAAGTAAAGTTAAATGAGCTGTAAGTGTTTAGGGAAATCTAAATGAGGCGGGCCCAGTGATGTATAAACATCAGGCATTTTAAGATTTGTTTCTCAACAGCATACTGTAAAGAGACATAATCCATTAGAAATGTTGCCAGTTTAAAAAACTGGTATGAAACAGACCAACTAAACACATTTTTGCAATATTCAGAGATACAGTAATATGCACACCCCTAATTGCTACAAATCATTTATAATGTGTCAGTATTGTTAGAGCTACATATGTAGCTGGTTATTGAACAGATCTGTATGAACAGATTTTTACATGCATTCTAATTGTTTTACAtttgaatttgttttggctTATTTGAAGATATTTGCATTTTGATCAATTGGTGTTTAAAATGCACCAGCTATGTAAACTGTGACTTTATACAAACATATGGTGACATTCATACAAAAGAGTGCTAATCTGCTCTTTGTCCTGCACAATTTTGCAAATTTcatgaatctctctctctctccttctctctatcCCTAATTAGTGAAATCTGAATGTTCATGATTCGACAATTTCTTGTTTGCTAATGTTATTTTCAAATGTACAGATTGCTTGACATTGTGGAATTTGTATGTATGAAATAGCAATACTGCAACATTTCacagtttttgttgttgaaaatgcTGTCCAGTTGTTCTTGTAATAAACATTTTCCTCTGAG

Function

GO: NA

KEGG:

id description
K24627 GAS2, GAS2L; growth arrest-specific protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005639511.1 lncRNA upstream 222610 19151533 ~ 19153584 (+) True LOC120560789
TU84161 lncRNA upstream 289332 19084934 ~ 19086862 (+) True G62836
TU84159 lncRNA upstream 289332 19085914 ~ 19086862 (+) False G62836
TU84163 lncRNA upstream 294540 19081080 ~ 19081654 (+) False tmem119a
TU84099 lncRNA upstream 393571 18966083 ~ 18982623 (+) True G62796
TU84387 lncRNA downstream 150157 19549410 ~ 19554906 (+) True G63005
TU84391 lncRNA downstream 156130 19555383 ~ 19562350 (+) True G63007
TU84393 lncRNA downstream 156130 19555383 ~ 19562350 (+) False G63007
TU84401 lncRNA downstream 176308 19575561 ~ 19581840 (+) False G63015
TU84402 lncRNA downstream 176308 19575561 ~ 19633642 (+) True G63015
XM_039802293.1 mRNA upstream 3585 19364006 ~ 19372609 (+) False ewsr1b
XM_039802290.1 mRNA upstream 3585 19364007 ~ 19372609 (+) True ewsr1b
XM_039802291.1 mRNA upstream 3585 19364008 ~ 19372609 (+) False ewsr1b
XM_039802292.1 mRNA upstream 3585 19364056 ~ 19372609 (+) False ewsr1b
XM_039802286.1 mRNA upstream 19048 19298555 ~ 19357146 (+) False emid1
XM_039803144.1 mRNA downstream 630 19399883 ~ 19427717 (+) False ap1b1
XM_039803142.1 mRNA downstream 916 19400169 ~ 19427717 (+) True ap1b1
XM_039803143.1 mRNA downstream 916 19400169 ~ 19427717 (+) False ap1b1
XM_039803145.1 mRNA downstream 916 19400169 ~ 19427717 (+) False ap1b1
XM_039803146.1 mRNA downstream 916 19400169 ~ 19427717 (+) False ap1b1
XR_005639481.1 other upstream 695033 18661157 ~ 18681161 (+) False acacb
TU83744 other upstream 956604 18416128 ~ 18419590 (+) False tbx5b
TU83742 other upstream 960188 18407387 ~ 18416006 (+) False tbx5b
TU83701 other upstream 1044964 18330705 ~ 18331230 (+) True G62513
XR_005639579.1 other upstream 1366876 17998686 ~ 18009318 (+) False cmya5
TU84360 other downstream 35654 19434907 ~ 19448950 (+) False rasl10a
XR_005639482.1 other downstream 1078559 20477812 ~ 20488838 (+) False wdr31
XR_005639483.1 other downstream 1078559 20477812 ~ 20488838 (+) False wdr31
TU85087 other downstream 1277164 20676417 ~ 20677916 (+) True G63480
XR_005639510.1 other downstream 2189623 21588876 ~ 21598799 (+) False LOC120560787

Expression Profile