RNA id: XM_039804116.1


Basic Information

Item Value
RNA id XM_039804116.1
length 1354
RNA type mRNA
GC content 0.52
exon number 11
gene id LOC120561147
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26295751 ~ 26307628 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAACCGGACTGATGGTGTGCGCGTGCTCGGCTCCCATTGTTTTCGTGTTTTCATTCATCTCCGCACGCAGCGTGAACAAAGGGGCGTCAGGGTCGCGCTCTGATTGGCTCCCGGCCACCCGACGCTACCGCGAGCTCCGCCACAGCAGATGGACCTCTCgtgctctcctcctccttgaTGCACGCGCCCCAGTGATTGTTTCCAACGGCAGGAGAGCTAGCGAGTTGAACAAGGAGTTTAACGTTAACGGACATTTCACCTTTTACggtgaagaagaggaaaaacgggaggaggaggtggaaaaGGAGAACCGGAGAGCCTTCGTCCACCGGGTTTGCTCCCTCTTTCTGGTGATTCAACAAGACCACACAGTCTTCACTACGCTCCTCTCATGCTTACTGAGAATGGATGATACAGAGTACGGGGTTCAGATTGGAGAGAACAAGTTCATCAGGAAGGCAACCGTCCTCTCACATCTGAAGACGTACAACCTCTACTATGAAGGACAGAATCTGCAGCTCAGACACAGAGAGGAAGAGGGGGAGCTGATTGTCGAGGGTTTGCTGAATATCTTCTGGGGTCTGCGGCGACCAATCAGGCTTCAGATGCAGGATGACCACGAGCGCATCCGACCGCCCCCCTCCTCTACGTCCTGGCACTCGGGTTGCAATCTGGACAGTCAAGGTTCCCCCAACAGCACAGATGGTCAACAAACGACACAGCAGAGCCCGCCCACAGTAGAAGTGACAGAACCTGACAGCCAACCAGAGGACGACGGTGTGATGGAAGAGCAGGCAGAAGAAGACAGTGAGAGCTCTGCTCAGCTGCTCAGAACTAAGAGCGATGCGGGCGTCTTGAGACGGGGCCAGCGACGGTCACCGAGCGACCAGAGGAAAATTCGACGCCATCGCTTCTCTATCAATGGACACTTCTACAACCATAAGacatCAGTGTTTACTCCTTCTTTCGGCTCGATGACTAATGTTCGGATCAACAGCTGCATGAGGACACCTCAGGTGCTTCGAGTTCTCCTCAACAAGTTTAAAATTGAAAACAGCCCAGATGATTTTGCCCTCTACCTCGTCCATGCAAGTGGAGAGCGTGTGAAACTGAAGCGAAATGACTATCCTCTGGTGCTGAGAGTGATTCAGGGTCCATGTGAGCAGGTCTGCAAGGTTTTCCTCATGGAGGAAGACCTCGGAGAAGAAGTCACGTATGATGTGGCACAGTATATCAAGTTTGAAATGCCAGTCCTGCAGAGTTTCATCACCAaactgaaggaggaggaggacagagaggtgCAGAAACTCAGAAGAAGGTATACGTACCTGCGGTGTATAATTGAAAAGCAGC

Function

GO: NA

KEGG:

id description
K09851 RASSF2_4; Ras association domain-containing protein 2/4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86587 lncRNA upstream 366593 25928924 ~ 25929158 (+) True G64677
TU86549 lncRNA upstream 367159 25926087 ~ 25928592 (+) False LOC120560359
TU86572 lncRNA upstream 373363 25922163 ~ 25922388 (+) True G64663
TU86567 lncRNA upstream 377658 25917765 ~ 25918093 (+) True G64658
TU86566 lncRNA upstream 378275 25917187 ~ 25917476 (+) True G64657
TU86725 lncRNA downstream 64006 26371634 ~ 26383843 (+) False nsd3
TU86797 lncRNA downstream 186707 26494335 ~ 26496987 (+) True c6h22orf39
TU86807 lncRNA downstream 204837 26512465 ~ 26514759 (+) True G64834
TU86810 lncRNA downstream 224124 26531752 ~ 26533420 (+) True G64836
TU86814 lncRNA downstream 227384 26535012 ~ 26535307 (+) False G64838
XM_039802420.1 mRNA upstream 4285 26249127 ~ 26291466 (+) True slc23a2
XM_039802421.1 mRNA upstream 4285 26249127 ~ 26291466 (+) False slc23a2
XM_039802423.1 mRNA upstream 4285 26249128 ~ 26291466 (+) False slc23a2
XM_039802422.1 mRNA upstream 4285 26249128 ~ 26291466 (+) False slc23a2
XM_039802416.1 mRNA upstream 50275 26197240 ~ 26245476 (+) False kcnip3b
XM_039803671.1 mRNA downstream 17121 26324749 ~ 26328928 (+) True sprn2
XM_039803583.1 mRNA downstream 51492 26359120 ~ 26381494 (+) True nsd3
XM_039803585.1 mRNA downstream 51492 26359120 ~ 26381494 (+) False nsd3
XM_039803586.1 mRNA downstream 51492 26359120 ~ 26381494 (+) False nsd3
XM_039803584.1 mRNA downstream 51492 26359120 ~ 26381494 (+) False nsd3
TU86550 other upstream 380222 25914382 ~ 25915529 (+) False LOC120560031
TU86491 other upstream 599181 25684972 ~ 25696570 (+) False LOC120561182
XR_005639471.1 other upstream 1461120 24823718 ~ 24834631 (+) False cdc14b
XR_005639472.1 other upstream 1461131 24823719 ~ 24834620 (+) False cdc14b
TU85875 other upstream 2602460 23692662 ~ 23693291 (+) True G64108
TU86770 other downstream 105241 26412869 ~ 26414597 (+) True G64814
TU86790 other downstream 186707 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other downstream 186707 26494335 ~ 26496328 (+) False c6h22orf39
TU86793 other downstream 186707 26494335 ~ 26496261 (+) False c6h22orf39
XR_005639500.1 other downstream 306609 26614237 ~ 26642481 (+) False cltcl1

Expression Profile