RNA id: XM_039804369.1


Basic Information

Item Value
RNA id XM_039804369.1
length 1918
RNA type mRNA
GC content 0.46
exon number 10
gene id acaa2
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26499573 ~ 26505004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACTGTACTGCGTTCTCTCTCATCCATTATATTTAGGAGAAAGGTCGCAGTAATCAGGTCTATAATCATCACGGACAGATTCAGAGTGCCACAAGAAGACATCGGCCCAAGAGTTTGATCCTGCTGGTTTGTTGATTCTGCATTATGGCGCTTCTCAGAGGTGTATTTGTTGTAGCTGCCAAGCGCACTCCGTTTGGTACCTATGGTGGCGTGCTGAAGGATCACAGTGCAACAGACTTGGCTGAGCATGCAGCCAAAGCCGCCCTTGCTGCAGGGAGCATTGCACCAGAACTTATAAACAGTGTCATCATGGGAAATGTCATGCAGAGCTCAGCTGATGCACCCTACATTGCTCGTCATGTGGGTTTGAGGTGTGGTGTTCCCATCCCAGTGCCTGCTCTTACTGTGAACAGACTGTGTGGATCTGGCTTCCAGTCCATCATCAATGGCGCTCAAGAGATTTGCCTTAGGGAGTCAGAGGTGGTCCTGTGTGGAGGCTCAGAGAGCATGAGCCAGGCTCCATATGCTGTTCGCAACATACGATTTGGTACAAAGTTTGGAGTCGATCTCaagCTAGAGGACACCTTGTGGGCGGGTCTGACTGACCTGCATGTCAAAATCCCAATGGGCATCACAGCAGAAAACCTGGCAGAGAAATACCAGATCACACGAGAAGAAGTTGACAACTATGCATACCAGACGCAACAAAAGTGGAAGGCCGCTCATGAGGCTGGTTACTATACAGCCGAAATTGCTCCCATTGATGTGAAAGCTAGAAAAGGCAAGGTGTCCATGGCTCAGGATGAACACCCTCGTCCACAGACAACACTAGAACAGTTAGCCAAACTGCCTCCTGTCTTCAAGAAGGGAGGGACTGTTACTGCTGCCAATGCTTCAGGTGTATCTGAtggtgctgcctgtgtggtGATTGCGAGTGAAGATGCGCTGAATGAACACAAGCTCACTCCACTGGCTAGAATTGTGGCCTATCATGTGTCAGGCTGTGACCCGAGCATTATGGGAATTGGTCCCGTTCCAGCAATCACAGGAGCTCTTAAAAAAGCCGGACTGACTCTCAACGACATGGATCTTGTGGAGGTGAACGAGGCTTTTGGTGCTCAATACCTGGCTGTTGCTAAGTCTCTTGGACTGGATCCAGCGAAAAGCAACGTTAACGGTGGAGCTATTGCCATCGGACATCCTCTCGGTGCTTCTGGAGCACGTATCACTGCCCACCTGGTTCATGAGCTCAGGCGACGAGGAGGCAAGTATGCTGTTGGCTCTGCCTGCATTGGTGGTGGTCAGGGCATCGCTATCATCCTTGAAAAGTACTGACCAAAATAGGTGCCAATATCAGAGGAATTCCTGTAGAAGAATGTCTTGTCCCACCATCTACTCGCATAAAATAAAACTCAGGTCATACATGCTAAAAAGAGATTTCCTTCACGTACAGATCAATGGCAAATCTTATCTTAACGTGAGGTACTGCTGGTCTGTTTTTCCCTGGCACACAAAGAaaactcaacattcattttttttgctgtaaCTCTAACTTCTTTCagcctatataaaaaaaaaaatggacaacAAATGTTTCAGTCCAGTTTTGCCTTGGAAGCCATGTGAAGATAAAGAGCTAACTCATGTTTCTGTGGTCGTTGCACCAGACTGTTTATGGATGTGCCTGAGACGCATAGCTAGTTCCTTGGTCTCATTAACTTGTGTAGCATAGCATTAACTCATAAAGTACAGTTTGTGTTGGGTTATAGTAAGGTTTAATGGAACTCTGAACTAAAAATGTTGCCATTAAAATGTTGTCTATCAGTCCATTATCAGGAATCATTTGTCTGACCTGTGATGGCTCCAGCAAAAGTTGTAATTCTGTGTCAAAGAAtctcaataaatacattttccaaaAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function

KEGG:

id description
K07508 ACAA2; acetyl-CoA acyltransferase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86797 lncRNA upstream 2586 26494335 ~ 26496987 (+) True c6h22orf39
TU86725 lncRNA upstream 115730 26371634 ~ 26383843 (+) False nsd3
TU86705 lncRNA upstream 177617 26303850 ~ 26321956 (+) True G64764
TU86587 lncRNA upstream 570415 25928924 ~ 25929158 (+) True G64677
TU86549 lncRNA upstream 570981 25926087 ~ 25928592 (+) False LOC120560359
TU86807 lncRNA downstream 7461 26512465 ~ 26514759 (+) True G64834
TU86810 lncRNA downstream 26748 26531752 ~ 26533420 (+) True G64836
TU86814 lncRNA downstream 30008 26535012 ~ 26535307 (+) False G64838
TU86813 lncRNA downstream 30104 26535108 ~ 26537695 (+) True G64838
TU86815 lncRNA downstream 33264 26538268 ~ 26538541 (+) True G64839
XM_039804411.1 mRNA upstream 3265 26494284 ~ 26496308 (+) False c6h22orf39
XM_039804409.1 mRNA upstream 6009 26489321 ~ 26493564 (+) True ufd1l
XM_039804408.1 mRNA upstream 11172 26476188 ~ 26488401 (+) True dhx37
XM_039804407.1 mRNA upstream 24255 26472774 ~ 26475318 (+) True gp1bb
XM_039804406.1 mRNA upstream 28871 26459626 ~ 26470702 (+) True sept5a
XM_039804313.1 mRNA downstream 1641 26506645 ~ 26511245 (+) True rpl6
XM_039804321.1 mRNA downstream 38022 26543026 ~ 26553731 (+) True vdac3
XM_039804322.1 mRNA downstream 38022 26543026 ~ 26553731 (+) False vdac3
XM_039804323.1 mRNA downstream 38022 26543026 ~ 26553731 (+) False vdac3
XM_039804324.1 mRNA downstream 38022 26543026 ~ 26553731 (+) False vdac3
TU86790 other upstream 3187 26494335 ~ 26496386 (+) False c6h22orf39
TU86791 other upstream 3245 26494335 ~ 26496328 (+) False c6h22orf39
TU86793 other upstream 3312 26494335 ~ 26496261 (+) False c6h22orf39
TU86770 other upstream 84976 26412869 ~ 26414597 (+) True G64814
TU86550 other upstream 584044 25914382 ~ 25915529 (+) False LOC120560031
XR_005639500.1 other downstream 109233 26614237 ~ 26642481 (+) False cltcl1
TU86927 other downstream 140016 26645020 ~ 26657969 (+) False si:dkey-178e17.1
TU87117 other downstream 700230 27205234 ~ 27301770 (+) True G65084
TU87830 other downstream 2845120 29350124 ~ 29351753 (+) False ubac1
XR_005639517.1 other downstream 3681844 30186848 ~ 30212108 (+) False fbxo21

Expression Profile